Hi Laure,

This is intentional behavior; galaxy sanitizes all html output as a security measure by default.  You can turn this off on your instance by changing "sanitize_all_html" to False in your universe_wsgi.ini.

There's a Trello card to track implementation of allowing administrators to individually pick which tools to trust, which you can see (and vote for, or follow) here:  https://trello.com/c/8iMhKlPX

-Dannon


On Wed, Feb 5, 2014 at 9:44 AM, Laure QUINTRIC <Laure.Quintric@ifremer.fr> wrote:
Hello galaxy users,

one of my tools returns an html output in which I have links to images and javascripts.
Images and Javascripts of the dataset_XXX.dat file are located in a dataset_XXX_files directory. Images are well displayed in galaxy output but javascripts aren't executed. Even an alert('foo') cannot be retrieved.

Has somebody already experiment this ? In other related posts, it's said to look at rgenetics fastqc wrapper but no javascript fonctions are called in the fastqc_report.html.

Thanks,
Laure
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