details: http://www.bx.psu.edu/hg/galaxy/rev/73847f425801 changeset: 2427:73847f425801 user: Greg Von Kuster <greg@bx.psu.edu> date: Mon Jun 01 10:27:04 2009 -0400 description: Add EuPathDb data source tool config. 1 file(s) affected in this change: tools/data_source/eupathdb.xml diffs (36 lines): diff -r e50551db6e60 -r 73847f425801 tools/data_source/eupathdb.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/data_source/eupathdb.xml Mon Jun 01 10:27:04 2009 -0400 @@ -0,0 +1,32 @@ +<!-- + If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in + the initial response. If value of 'URL_method' is 'post', any additional params coming back in the + initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed. +--> +<tool name="EuPathDB" id="eupathdb" tool_type="data_source" url_method="post"> + <description>server</description> + <command interpreter="python">data_source.py $output</command> + <inputs action="http://galaxy.eupathdb.org/eupathdb.galaxy/queries_tools.jsp" check_values="false" method="post"> + <display>go to EuPathDB server $GALAXY_URL</display> + <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=eupathdb" /> + </inputs> + <request_param_translation> + <request_param galaxy_name="URL" remote_name="URL" missing=""> + <add_to_url> + <param_from_source name="dbkey" missing="?" /> + <param_from_source name="wdk_history_id" missing="" /> + <param_from_source name="wdkReportFormat" missing="tabular" /> + <param_from_source name="selectedFields" missing="" /> + <param_from_source name="includeHeader" missing="yes" /> + <param_from_source name="downloadType" missing="plain" /> + </add_to_url> + </request_param> + <request_param galaxy_name="format" remote_name="wdkReportFormat" missing="tabular" /> + <request_param galaxy_name="dbkey" remote_name="dbkey" missing="?" /> + </request_param_translation> + <uihints minwidth="800"/> + <outputs> + <data name="output" format="txt" /> + </outputs> + <options sanitize="False" refresh="True"/> +</tool>