I have a local galaxy installation running on OSX and have been testing it with genomes: hg18 and sacCer2. I've added these to builds.txt, and added paths to the appropriate files in alignsec.loc and faseq.loc. When I go to the upload tab in galaxy and select one of these genomes from the pull-down menu, I get the following error after execution:

Error Traceback:

View as:   Interactive  |  Text  |  XML (full)
⇝ ValueError: too many values to unpack
URL: http://localhost:8081/tool_runner/index
Module weberror.evalexception.middleware:364 in respond          view
>>  app_iter = self.application(environ, detect_start_response)
Module paste.debug.prints:98 in __call__          view
>>  environ, self.app)
Module paste.wsgilib:539 in intercept_output          view
>>  app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__          view
>>  return self.application(environ, start_response)
Module paste.httpexceptions:632 in __call__          view
>>  return self.application(environ, start_response)
Module galaxy.web.framework.base:126 in __call__          view
>>  body = method( trans, **kwargs )
Module galaxy.web.controllers.tool_runner:68 in index          view
>>  template, vars = tool.handle_input( trans, params.__dict__ )
Module galaxy.tools:835 in handle_input          view
>>  _, out_data = self.execute( trans, incoming=params )
ValueError: too many values to unpack


URL: http://localhost:8081/tool_runner/index File '/Library/WebServer/galaxy/galaxy-central/eggs/WebError-0.8a-py2.5.egg/weberror/evalexception/middleware.py', line 364 in respond app_iter = self.application(environ, detect_start_response) File '/Library/WebServer/galaxy/galaxy-central/eggs/Paste-1.6-py2.5.egg/paste/debug/prints.py', line 98 in __call__ environ, self.app) File '/Library/WebServer/galaxy/galaxy-central/eggs/Paste-1.6-py2.5.egg/paste/wsgilib.py', line 539 in intercept_output app_iter = application(environ, replacement_start_response) File '/Library/WebServer/galaxy/galaxy-central/eggs/Paste-1.6-py2.5.egg/paste/recursive.py', line 80 in __call__ return self.application(environ, start_response) File '/Library/WebServer/galaxy/galaxy-central/eggs/Paste-1.6-py2.5.egg/paste/httpexceptions.py', line 632 in __call__ return self.application(environ, start_response) File '/Library/WebServer/galaxy/galaxy-central/lib/galaxy/web/framework/base.py', line 126 in __call__ body = method( trans, **kwargs ) File '/Library/WebServer/galaxy/galaxy-central/lib/galaxy/web/controllers/tool_runner.py', line 68 in index template, vars = tool.handle_input( trans, params.__dict__ ) File '/Library/WebServer/galaxy/galaxy-central/lib/galaxy/tools/__init__.py', line 835 in handle_input _, out_data = self.execute( trans, incoming=params ) ValueError: too many values to unpack

Any idea as to why this is happening?


Rgds,


Roy W.

--
Roy Weckiewicz
Texas A&M University