Dear Sir,
We have a program writen in C lanuage. It can run nomally in linux environment.
We plan to add it to galaxy, but it did not work.
The C file after complie named "shortest-path"
The shortest-path.xml is as follow:
Could anybody tell me what is wrong ? why it does not work?
Thank you very much!
Best Wishes!
Yan-Hui Li
<tool id="shortest_path_1" name="shortest_path">
<command interpreter="C">./shortest_path $infile1 $output </command>
<inputs>
<param format="text" name="infile1" type="data"
label="
expressed_genes_20101024.hprd8_biogrid-2.0.58.adj_matrix.txt
"/>
</inputs>
<outputs>
<data format="tabular" name="output" />
</outputs>
<tests>
<test>
<param name="input" value="1"/>
<param name="input" value="../GEO_dataset/expressed_genes_u133a.6k_u133p2.8k_20101024.txt"/>
<param name="input" value="../ppi/hprd8_biogrid-2.0.58.ppi.txt"/>
<output name="out_file1" file="expressed_genes_20101024.hprd8_biogrid-2.0.58.ppi.txt"/>
</test>
</tests>
</tool>