Hi galaxy-dev,

I'm having a problem running a test using planemo where I would like the value of a parameter taken from one of the data tables. I get the following error in planemo:

'Error creating a job for these tool inputs - Parameter refGenomeSource_type requires a value, but has no legal values defined.\n

From my script XML:

 <param name="refGenomeSource_type" type="select" label="Select a reference genome / transcriptome">
      <options from_data_table="type_indexes">
      </options>
</param>
...
  <tests>
      <test>
        <param name="refGenomeSource_type" value="hsapiens"/>
     </test>
  </tests>

From my "tool_data_table_conf.xml.sample" and "tool_data_table_conf.xml.test" (mirrored)

<table name="type_indexes" comment_char="#" allow_duplicate_entries="False">
        <columns>value, name, path</columns>
        <file path="tool-data/twobit.loc" />    
</table>

and from twobit.loc (where the columns are tab separated):

hsapiens        H. sapiens (hg38)       /remote/RMS/users/galaxy/reference_genomes/MFEprimer_index/Homo_sapiens.GRCh38.cdna.all.fa

Any suggestions would be greatly appreciated! 

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/