Hello all,<br><br>I&#39;d like to define &#39;blastxml&#39; to &#39;tabular&#39; conversion within Galaxy<br>so that this can be used automatically (e.g. Tools expecting just<br>tabular data would have converted BLAST XML files listed in the<br>
drop down). The functionality to do this exists in my Python tool<br>&#39;blastxml_to_tabular&#39; currently in the &#39;ncbi_blast_plus&#39; repository,<br>which might have to move into &#39;blast_datatypes&#39; for this to work.<br>
<a href="http://toolshed.g2.bx.psu.edu/view/devteam/ncbi_blast_plus">http://toolshed.g2.bx.psu.edu/view/devteam/ncbi_blast_plus</a><br><a href="http://toolshed.g2.bx.psu.edu/view/devteam/blast_datatypes">http://toolshed.g2.bx.psu.edu/view/devteam/blast_datatypes</a><br>
<br>I&#39;ve skimmed over the instructions here, but would like to look<br>at a couple of real examples to make sure I&#39;ve understood:<br><a href="http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-February/013434.html">http://lists.bx.psu.edu/pipermail/galaxy-dev/2013-February/013434.html</a><br>
<br>Are there any good examples of 3rd party Galaxy datatypes<br>defining conversion like this?<br><br>Thanks,<br><br>Peter<br><br>