Thanks John and Bjoern for your reply.

Conda is working properly when i trigger it manually as a galaxy user. (example: $conda_prefix/conda install bwa -c bioconda)

I tried to remove the conda_prefix directory and it was reinstalled after restarting the galaxy. But still I am getting the same issue when installing tools from the toolshed.

I also tried updating the conda using "conda update conda" but didnt help.

Do i have to adjust the PYTHONPATH in my supervisor configuration ?

Regards,

Ashok

On Thu, Mar 2, 2017 at 10:14 PM, Björn Grüning <bjoern.gruening@gmail.com> wrote:

Hi Ashok,

this seems to be a problem with your conda installation.

See for example here: https://github.com/conda/conda/issues/2463
Can you update your conda manually?

Cheers,
Bjoern

Am 02.03.2017 um 17:47 schrieb Ashok Varadharajan:
> ImportError: No module named conda.cli.main

Thanks and Regards,

Ashok Varadharajan