Hey Greg,

We put together a quick workaround until we're able to resolve the underlying issues.  You can launch the previous incarnation of galaxy (pre-update AMI and Cloudman versions) using https://main.g2.bx.psu.edu/cloudlaunch?ami=ami-da58aab3&bucket_default=gxy-workshop

Once your instance is up, enter your share string like usual and it'll work fine.  We expect to fix these issues next week, but this should get your instance back up and running for now.


On Mon, Jul 15, 2013 at 10:19 AM, greg <margeemail@gmail.com> wrote:
Thanks for getting back to me, Enis.

I went ahead and started a new cluster instance.  I'll try to leave it
running today in case there's anything we want to check.

Here's my whole process:

Start Screen Setup:
----------------------------------
http://snag.gy/DMIeC.jpg

Entering my share string:
----------------------------------------
http://snag.gy/wKFLy.jpg


Main Page Text and log:
------------------------------------
Cluster name:

MSGGREG

Disk status:

0 / 0 (0%)

Worker status:

Idle: 0 Available: 0 Requested: 0

Service status:

Applications

 Data


Cluster status log

14:08:32 - Master starting
14:08:34 - Completed the initial cluster startup process. This is a
new cluster; waiting to configure the type.
14:08:50 - Migration service prerequisites OK; starting the service
14:08:50 - SGE service prerequisites OK; starting the service
14:08:58 - Setting up SGE...
14:09:13 - HTCondor service prerequisites OK; starting the service
14:09:21 - Hadoop service prerequisites OK; starting the service
14:09:38 - Done adding Hadoop service; service running.
14:11:53 - Error creating volume from shared cluster's snapshot
'['snap-cfa775ba']': 'filesystems'



Admin Page CloudMan Log: (unfortunately nothing is jumping out at me?)
-----------------------------------------------

CloudMan from Galaxy
Admin | Report bugs | Wiki | Screencast
The entire log file (paster.log) is shown. Show latest | Back to admin view
Python version:  (2, 7)
Image configuration suports: {'apps': ['cloudman', 'galaxy']}
2013-07-15 14:08:32,406 DEBUG            app:68   Initializing app
2013-07-15 14:08:32,407 DEBUG            ec2:121  Gathering instance
zone, attempt 0
2013-07-15 14:08:32,410 DEBUG            ec2:127  Instance zone is 'us-east-1d'
2013-07-15 14:08:32,410 DEBUG            ec2:45   Gathering instance
ami, attempt 0
2013-07-15 14:08:32,412 DEBUG            app:71   Running on 'ec2'
type of cloud in zone 'us-east-1d' using image 'ami-118bfc78'.
2013-07-15 14:08:32,412 DEBUG            app:89   Getting pd.yaml
2013-07-15 14:08:32,412 DEBUG            ec2:338  No S3 Connection,
creating a new one.
2013-07-15 14:08:32,413 DEBUG            ec2:342  Got boto S3 connection.
2013-07-15 14:08:32,452 DEBUG           misc:212  Checking if bucket
'cm-0479bd75a331acc874033e98b2e1e03e' exists... it does not.
2013-07-15 14:08:32,452 DEBUG           misc:583  Bucket
'cm-0479bd75a331acc874033e98b2e1e03e' does not exist, did not get
remote file 'persistent_data.yaml'
2013-07-15 14:08:32,452 DEBUG            app:96   Setting
deployment_version to 2
2013-07-15 14:08:32,453 INFO             app:103  Master starting
2013-07-15 14:08:32,453 DEBUG         master:55   Initializing console
manager - cluster start time: 2013-07-15 14:08:32.453182
2013-07-15 14:08:32,453 DEBUG           comm:42   AMQP Connection
Failure:  [Errno 111] Connection refused
2013-07-15 14:08:32,453 DEBUG         master:791  Trying to discover
any worker instances associated with this cluster...
2013-07-15 14:08:32,454 DEBUG            ec2:317  Establishing boto
EC2 connection
2013-07-15 14:08:32,535 DEBUG            ec2:305  Got region as
'RegionInfo:us-east-1'
2013-07-15 14:08:32,777 DEBUG            ec2:326  Got boto EC2
connection for region 'us-east-1'
2013-07-15 14:08:33,022 DEBUG           misc:574  Retrieved file
'snaps.yaml' from bucket 'cloudman' on host 's3.amazonaws.com' to
'cm_snaps.yaml'.
2013-07-15 14:08:33,035 DEBUG            ec2:286  Got region name as 'us-east-1'
2013-07-15 14:08:33,035 DEBUG         master:226  Loaded default
snapshot data: [{'snap_id': 'snap-adad90fc', 'name': 'galaxy',
'roles': 'galaxyTools,galaxyData'}, {'snap_id': 'snap-5b030634',
'name': 'galaxyIndices', 'roles': 'galaxyIndices'}]
2013-07-15 14:08:33,035 DEBUG            ec2:81   Gathering instance
id, attempt 0
2013-07-15 14:08:33,037 DEBUG            ec2:87   Instance ID is 'i-5346d733'
2013-07-15 14:08:33,125 DEBUG            ec2:360  Adding tag
'clusterName:MSGGREG' to resource 'i-5346d733'
2013-07-15 14:08:33,307 DEBUG            ec2:360  Adding tag
'role:master' to resource 'i-5346d733'
2013-07-15 14:08:33,554 DEBUG            ec2:360  Adding tag
'Name:master: MSGGREG' to resource 'i-5346d733'
2013-07-15 14:08:33,744 DEBUG         master:246  ud at manager start:
{'region_name': u'us-east-1', 'region_endpoint': u'ec2.amazonaws.com',
'ec2_port': None, 'deployment_version': 2, 'cloud_name': u'Amazon',
'boot_script_name': 'cm_boot.py', 'is_secure': True, 'password':
'4444', 'access_key': 'redacted!', 's3_port': None, 'cloud_type':
u'ec2', 'cloudman_home': '/mnt/cm', 'cluster_name': u'MSGGREG',
'freenxpass': u'4444', 'bucket_default': 'cloudman', 'role': 'master',
'bucket_cluster': 'cm-0479bd75a331acc874033e98b2e1e03e',
'boot_script_path': '/tmp/cm', 'secret_key': u'redacted!',
's3_conn_path': u'/', 's3_host': u's3.amazonaws.com', 'ec2_conn_path':
u'/'}
2013-07-15 14:08:33,744 DEBUG         master:1858 Generating root
user's public key...
2013-07-15 14:08:33,763 DEBUG           base:57   Enabling 'root'
controller, class: CM
2013-07-15 14:08:33,766 DEBUG       buildapp:88   Enabling
'httpexceptions' middleware
2013-07-15 14:08:33,770 DEBUG       buildapp:94   Enabling 'recursive'
middleware
2013-07-15 14:08:33,776 DEBUG       buildapp:114  Enabling 'print
debug' middleware
2013-07-15 14:08:33,788 DEBUG       buildapp:128  Enabling 'error' middleware
2013-07-15 14:08:33,788 DEBUG       buildapp:138  Enabling 'config' middleware
2013-07-15 14:08:33,789 DEBUG       buildapp:142  Enabling
'x-forwarded-host' middleware
Starting server in PID 1791.
serving on 0.0.0.0:42284 view at http://127.0.0.1:42284
2013-07-15 14:08:34,198 DEBUG         master:1861 Successfully
generated root user's public key.
2013-07-15 14:08:34,199 DEBUG         master:1869 Successfully
retrieved root user's public key from file.
2013-07-15 14:08:34,199 DEBUG         master:99   Updating
dependencies for service Migration
2013-07-15 14:08:34,199 DEBUG         master:99   Updating
dependencies for service SGE
2013-07-15 14:08:34,200 DEBUG     filesystem:32   Instantiating
Filesystem object transient_nfs with service roles: TransientNFS
2013-07-15 14:08:34,200 DEBUG     filesystem:594  Configuring instance
transient storage at /mnt/transient_nfs with NFS.
2013-07-15 14:08:34,200 DEBUG         master:99   Updating
dependencies for service transient_nfs
2013-07-15 14:08:34,200 DEBUG            pss:27   Configured PSS as master
2013-07-15 14:08:34,200 DEBUG         master:99   Updating
dependencies for service PSS
2013-07-15 14:08:34,200 DEBUG       htcondor:25   Condor is preparing
2013-07-15 14:08:34,200 DEBUG         master:99   Updating
dependencies for service HTCondor
2013-07-15 14:08:34,201 DEBUG         master:99   Updating
dependencies for service Hadoop
2013-07-15 14:08:34,201 DEBUG         master:321  Checking for and
adding any previously defined cluster services
2013-07-15 14:08:34,201 DEBUG         master:327  Processing
filesystems in an existing cluster config
2013-07-15 14:08:34,201 DEBUG         master:812  Trying to discover
any volumes attached to this instance...
2013-07-15 14:08:34,377 DEBUG         master:829  Attached volumes:
[Volume:vol-cc9b1791]
2013-07-15 14:08:34,378 DEBUG            ec2:360  Adding tag
'clusterName:MSGGREG' to resource 'vol-cc9b1791'
2013-07-15 14:08:34,545 DEBUG         master:385  Processing
application services in an existing cluster config
2013-07-15 14:08:34,545 INFO          master:298  Completed the
initial cluster startup process. This is a new cluster; waiting to
configure the type.
2013-07-15 14:08:34,545 DEBUG         master:2342 Monitor started;
manager started
2013-07-15 14:08:38,545 DEBUG         master:2352 Trying to setup AMQP
connection; conn = ''
2013-07-15 14:08:38,546 DEBUG           comm:42   AMQP Connection
Failure:  [Errno 111] Connection refused
2013-07-15 14:08:42,546 DEBUG         master:2352 Trying to setup AMQP
connection; conn = ''
2013-07-15 14:08:42,547 DEBUG           comm:42   AMQP Connection
Failure:  [Errno 111] Connection refused
2013-07-15 14:08:46,547 DEBUG         master:2352 Trying to setup AMQP
connection; conn = ''
2013-07-15 14:08:46,550 DEBUG     connection:661  Start from server,
version: 8.0, properties: {u'information': u'Licensed under the MPL.
See http://www.rabbitmq.com/', u'product': u'RabbitMQ', u'copyright':
u'Copyright (C) 2007-2011 VMware, Inc.', u'capabilities': {},
u'platform': u'Erlang/OTP', u'version': u'2.7.1'}, mechanisms:
[u'PLAIN', u'AMQPLAIN'], locales: [u'en_US']
2013-07-15 14:08:46,551 DEBUG     connection:507  Open OK! known_hosts []
2013-07-15 14:08:46,551 DEBUG        channel:70   using channel_id: 1
2013-07-15 14:08:46,552 DEBUG        channel:484  Channel open
2013-07-15 14:08:46,555 DEBUG           comm:40   Successfully
established AMQP connection
2013-07-15 14:08:50,556 DEBUG         master:2377 S&S:
Migration..Unstarted; SGE..Unstarted; FS-transient_nfs..Unstarted;
PSS..Unstarted; HTCondor..Unstarted; Hadoop..Unstarted;
2013-07-15 14:08:50,556 DEBUG         master:2288 Monitor adding
service 'Migration'
2013-07-15 14:08:50,556 INFO        __init__:284  Migration service
prerequisites OK; starting the service
2013-07-15 14:08:50,556 DEBUG   migration_service:284  Starting
migration service...
2013-07-15 14:08:50,556 DEBUG   migration_service:332  Old deployment version: 2
2013-07-15 14:08:50,556 DEBUG   migration_service:324  Current
deployment version: 2
2013-07-15 14:08:50,556 DEBUG   migration_service:300  No migration
required. Service complete.
2013-07-15 14:08:50,556 DEBUG         master:2288 Monitor adding service 'SGE'
2013-07-15 14:08:50,557 INFO        __init__:284  SGE service
prerequisites OK; starting the service
2013-07-15 14:08:50,557 DEBUG            sge:100  Unpacking SGE from
'/opt/galaxy/pkg/ge6.2u5'
2013-07-15 14:08:50,560 DEBUG            sge:123  Unpacking SGE to '/opt/sge'.
2013-07-15 14:08:58,715 INFO             sge:159  Setting up SGE...
2013-07-15 14:08:58,716 DEBUG            ec2:188  Gathering instance
private IP, attempt 0
2013-07-15 14:08:58,719 DEBUG            sge:166  Created SGE install
template as file '/opt/sge/galaxyEC2.conf'
2013-07-15 14:08:58,719 DEBUG            sge:168  Setting up SGE.
2013-07-15 14:08:58,719 DEBUG           misc:750  Replacing string '
      libc_version=`echo $libc_string | tr ' ,' '\n' | grep "2\." |
cut -f 2 -d "."`' with '         libc_version=`echo $libc_string | tr
' ,' '\n' | grep "2\." | cut -f 2 -d "." | sort -u`' in file
/opt/sge/util/arch
2013-07-15 14:08:58,721 DEBUG           misc:750  Replacing string '
2.[46].*)' with '   [23].[24567890].*)' in file /opt/sge/util/arch
2013-07-15 14:08:58,721 DEBUG           misc:750  Replacing string '
   2.6.*)' with '      [23].[24567890].*)' in file /opt/sge/util/arch
2013-07-15 14:08:58,744 DEBUG           misc:724  Modified /opt/sge/util/arch
2013-07-15 14:08:58,763 DEBUG           misc:724  Successfully chmod
/opt/sge/util/arch
2013-07-15 14:08:58,783 DEBUG           misc:724  'sed -i.bak
'/^127.0.1./s/^/# (Commented by CloudMan) /' /etc/hosts' command OK
2013-07-15 14:09:11,740 DEBUG           misc:724  Successfully set up SGE
2013-07-15 14:09:11,740 DEBUG            sge:171  Successfully setup
SGE; configuring SGE
2013-07-15 14:09:11,740 DEBUG            sge:172  Adding parallel environments
2013-07-15 14:09:11,769 DEBUG           misc:724  'cd /opt/sge;
./bin/lx24-amd64/qconf -Ap /tmp/SMP_PE' command OK
2013-07-15 14:09:11,797 DEBUG           misc:724  'cd /opt/sge;
./bin/lx24-amd64/qconf -Ap /tmp/MPI_PE' command OK
2013-07-15 14:09:11,797 DEBUG            sge:180  Creating queue 'all.q'
2013-07-15 14:09:11,798 DEBUG            sge:201  Created SGE all.q
template as file '/opt/sge/all.q.conf'
2013-07-15 14:09:11,827 DEBUG           misc:724  Successfully modified all.q
2013-07-15 14:09:11,828 DEBUG            sge:206  Configuring users'
SGE profiles
2013-07-15 14:09:11,828 DEBUG         master:2288 Monitor adding
service 'FS-transient_nfs'
2013-07-15 14:09:11,829 DEBUG     filesystem:106  Trying to add file
system service FS-transient_nfs
2013-07-15 14:09:11,829 DEBUG   transient_storage:55   Adding
transient file system at /mnt/transient_nfs
2013-07-15 14:09:11,881 DEBUG     filesystem:403  Added
'/mnt/transient_nfs *(rw,sync,no_root_squash,no_subtree_check)' line
to NFS file /etc/exports
2013-07-15 14:09:11,882 DEBUG     filesystem:468  FS-transient_nfs in
'Starting' state for 0 seconds
2013-07-15 14:09:13,065 DEBUG           misc:724  As part of
transient_nfs filesystem update, successfully restarted NFS server
2013-07-15 14:09:13,066 DEBUG     filesystem:468  FS-transient_nfs in
'Starting' state for 1 seconds
2013-07-15 14:09:13,067 DEBUG     filesystem:135  Done adding devices
to FS-transient_nfs (devices: [], [], [Transient storage @
/mnt/transient_nfs], -)
2013-07-15 14:09:13,067 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:13,067 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:13,067 DEBUG         master:2288 Monitor adding
service 'HTCondor'
2013-07-15 14:09:13,067 INFO        __init__:284  HTCondor service
prerequisites OK; starting the service
2013-07-15 14:09:13,067 DEBUG       htcondor:38   Starting HTCondor service
2013-07-15 14:09:13,068 DEBUG       htcondor:67   HTCondor params:
{'flock_host': ''}
2013-07-15 14:09:14,208 DEBUG           misc:724  '/etc/init.d/condor
restart' command OK
2013-07-15 14:09:14,209 DEBUG         master:2288 Monitor adding
service 'Hadoop'
2013-07-15 14:09:14,209 DEBUG       __init__:290  Hadoop service
prerequisites are not yet satisfied, waiting for: []. Setting Hadoop
service state to 'Unstarted'
2013-07-15 14:09:14,209 DEBUG         master:2199 Storing cluster
configuration to cluster's bucket
2013-07-15 14:09:14,798 DEBUG           misc:212  Checking if bucket
'cm-0479bd75a331acc874033e98b2e1e03e' exists... it does not.
2013-07-15 14:09:15,090 DEBUG           misc:224  Created bucket
'cm-0479bd75a331acc874033e98b2e1e03e'.
2013-07-15 14:09:15,237 DEBUG           misc:595  Saved file
'persistent_data.yaml' of size 537B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:15,237 DEBUG         master:2244 Saving current
instance boot script (/tmp/cm/cm_boot.py) to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'cm_boot.py'
2013-07-15 14:09:15,424 DEBUG           misc:595  Saved file
'cm_boot.py' of size 19845B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:15,424 DEBUG         master:2254 Saving CloudMan
source (/mnt/cm/cm.tar.gz) to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'cm.tar.gz'
2013-07-15 14:09:15,680 DEBUG           misc:595  Saved file
'cm.tar.gz' of size 793622B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:15,680 DEBUG           misc:685  Setting metadata
'revision' for file 'cm.tar.gz' in bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:15,921 DEBUG         master:2280 Saving
'/mnt/cm/MSGGREG.clusterName' file to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'MSGGREG.clusterName'
2013-07-15 14:09:15,985 DEBUG           misc:595  Saved file
'MSGGREG.clusterName' of size 0B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:16,006 DEBUG         master:1755 Checking for new
version of CloudMan
2013-07-15 14:09:16,006 DEBUG           misc:667  Getting metadata
'revision' for file 'cm.tar.gz' from bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:16,066 DEBUG           misc:667  Getting metadata
'revision' for file 'cm.tar.gz' from bucket 'cloudman'
2013-07-15 14:09:16,184 DEBUG         master:1762 Revision number for
user's CloudMan: '732'; revision number for default CloudMan: '732'
2013-07-15 14:09:16,184 DEBUG            ec2:61   Gathering instance
type, attempt 0
2013-07-15 14:09:16,457 DEBUG            ec2:258  Gathering instance
public hostname, attempt 0
2013-07-15 14:09:21,091 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.76
lx24-amd64    ']
2013-07-15 14:09:21,096 DEBUG     filesystem:468  FS-transient_nfs in
'Starting' state for 9 seconds
2013-07-15 14:09:21,096 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..Starting;
PSS..Unstarted; HTCondor..OK; Hadoop..Unstarted;
2013-07-15 14:09:21,097 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:21,097 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:21,097 DEBUG         master:2288 Monitor adding
service 'Hadoop'
2013-07-15 14:09:21,097 INFO        __init__:284  Hadoop service
prerequisites OK; starting the service
2013-07-15 14:09:21,097 DEBUG         hadoop:38   Configuring Hadoop
2013-07-15 14:09:21,098 DEBUG         master:2199 Storing cluster
configuration to cluster's bucket
2013-07-15 14:09:21,101 DEBUG         hadoop:81   Unpacking Hadoop
2013-07-15 14:09:21,101 DEBUG         hadoop:84   Hadoop path is
/opt/hadoop/hadoop\.((([|0-9])*\.)*[0-9]*__([0-9]*\.)*[0-9]+){0,1}\.{0,1}tar\.gz
2013-07-15 14:09:21,101 DEBUG         hadoop:87   Hadoop SGE
integration path is
/opt/hadoop/sge_integration\.(([0-9]*\.)*[0-9]+){0,1}\.{0,1}tar\.gz
2013-07-15 14:09:21,106 DEBUG         hadoop:180  Extracted Hadoop
version: 1.0.4
2013-07-15 14:09:21,106 DEBUG         hadoop:181  Extracted Hadoop
build version: 1.0
2013-07-15 14:09:21,174 DEBUG         hadoop:180  Extracted Hadoop
version: 1.0.4
2013-07-15 14:09:21,175 DEBUG         hadoop:181  Extracted Hadoop
build version: 1.0
2013-07-15 14:09:21,821 DEBUG           misc:595  Saved file
'persistent_data.yaml' of size 537B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:21,822 DEBUG         master:2244 Saving current
instance boot script (/tmp/cm/cm_boot.py) to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'cm_boot.py'
2013-07-15 14:09:21,902 DEBUG           misc:595  Saved file
'cm_boot.py' of size 19845B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:21,902 DEBUG         master:2254 Saving CloudMan
source (/mnt/cm/cm.tar.gz) to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'cm.tar.gz'
2013-07-15 14:09:22,158 DEBUG           misc:595  Saved file
'cm.tar.gz' of size 793622B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:22,158 DEBUG           misc:685  Setting metadata
'revision' for file 'cm.tar.gz' in bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:22,621 DEBUG         master:2280 Saving
'/mnt/cm/MSGGREG.clusterName' file to cluster bucket
'cm-0479bd75a331acc874033e98b2e1e03e' as 'MSGGREG.clusterName'
2013-07-15 14:09:22,683 DEBUG           misc:595  Saved file
'MSGGREG.clusterName' of size 0B to bucket
'cm-0479bd75a331acc874033e98b2e1e03e'
2013-07-15 14:09:26,686 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:26,686 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:30,689 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:30,690 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:35,352 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.76
lx24-amd64    ']
2013-07-15 14:09:35,356 DEBUG     filesystem:468  FS-transient_nfs in
'Starting' state for 23 seconds
2013-07-15 14:09:35,357 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..Starting;
PSS..Unstarted; HTCondor..OK; Hadoop..Starting;
2013-07-15 14:09:35,357 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:35,358 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:38,802 DEBUG         hadoop:141  Hadoop extracted to
/opt/hadoop
2013-07-15 14:09:38,821 DEBUG         hadoop:146  Hadoop SGE
integration extracted to /opt/hadoop
2013-07-15 14:09:38,848 DEBUG           misc:724  'chown -R -c ubuntu
/opt/hadoop/sge_integration.1.0.tar.gz' command OK
2013-07-15 14:09:38,872 DEBUG           misc:724  'chown -R -c ubuntu
/opt/hadoop/hadoop.1.0.4__1.0.tar.gz' command OK
2013-07-15 14:09:38,873 DEBUG         hadoop:190  Setting up Hadoop environment
2013-07-15 14:09:38,874 DEBUG         hadoop:195  Hadoop id_rsa set
from::/opt/hadoop/id_rsa
2013-07-15 14:09:38,899 DEBUG           misc:724  'chown -c ubuntu
/home/ubuntu/.ssh/id_rsa' command OK
2013-07-15 14:09:38,899 DEBUG         hadoop:199  Hadoop authFile
saved to /home/ubuntu/.ssh/id_rsa
2013-07-15 14:09:38,923 DEBUG           misc:724  'chown -c ubuntu
/home/ubuntu/.ssh/authorized_keys' command OK
2013-07-15 14:09:38,924 INFO          hadoop:51   Done adding Hadoop
service; service running.
2013-07-15 14:09:39,363 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:39,363 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:43,365 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:43,365 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:47,907 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.76
lx24-amd64    ']
2013-07-15 14:09:47,934 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:09:47,934 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:47,935 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:51,936 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:51,937 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:09:55,938 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:09:55,938 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:00,482 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.87
lx24-amd64    ']
2013-07-15 14:10:00,508 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:10:00,509 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:00,509 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:04,511 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:04,512 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:08,513 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:08,514 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:16,307 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.87
lx24-amd64    ']
2013-07-15 14:10:16,336 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:10:16,336 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:16,337 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:20,339 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:20,339 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:24,890 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.87
lx24-amd64    ']
2013-07-15 14:10:24,921 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:10:24,922 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:24,922 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:28,924 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:28,924 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:32,926 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:32,927 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:37,472 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.88
lx24-amd64    ']
2013-07-15 14:10:37,500 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:10:37,501 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:37,501 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:41,503 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:41,504 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:45,505 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:45,505 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:50,046 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.88
lx24-amd64    ']
2013-07-15 14:10:50,075 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:10:50,076 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:50,076 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:54,078 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:54,079 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:10:58,080 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:10:58,081 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:02,633 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.88
lx24-amd64    ']
2013-07-15 14:11:02,662 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:11:02,662 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:02,662 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:06,664 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:06,665 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:10,667 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:10,668 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:15,212 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.77
lx24-amd64    ']
2013-07-15 14:11:15,240 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:11:15,241 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:15,241 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:19,243 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:19,243 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:23,245 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:23,246 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:27,785 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.77
lx24-amd64    ']
2013-07-15 14:11:27,814 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:11:27,814 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:27,815 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:31,816 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:31,817 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:35,818 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:35,819 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:40,362 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.77
lx24-amd64    ']
2013-07-15 14:11:40,390 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:11:40,391 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:40,391 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:44,393 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:44,394 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:48,395 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:48,396 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:50,209 DEBUG         master:1252 Initializing a
shared cluster from
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47'
2013-07-15 14:11:50,392 DEBUG           misc:574  Retrieved file
'shared/2012-09-17--19-47/shared_instance_file_list.txt' from bucket
'cm-808d863548acae7c2328c39a90f52e29' on host 's3.amazonaws.com' to
'shared_instance_file_list.txt'.
2013-07-15 14:11:50,394 DEBUG           misc:615  Establishing handle
with key object 'shared/2012-09-17--19-47/persistent_data.yaml'
2013-07-15 14:11:50,394 DEBUG           misc:619  Copying file
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47/persistent_data.yaml'
to file 'cm-0479bd75a331acc874033e98b2e1e03e/persistent_data.yaml'
2013-07-15 14:11:50,550 DEBUG           misc:615  Establishing handle
with key object 'shared/2012-09-17--19-47/cm.tar.gz'
2013-07-15 14:11:50,550 DEBUG           misc:619  Copying file
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47/cm.tar.gz'
to file 'cm-0479bd75a331acc874033e98b2e1e03e/cm.tar.gz'
2013-07-15 14:11:50,771 DEBUG           misc:615  Establishing handle
with key object 'shared/2012-09-17--19-47/cm.tar.gz_2012-09-13'
2013-07-15 14:11:50,771 DEBUG           misc:619  Copying file
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47/cm.tar.gz_2012-09-13'
to file 'cm-0479bd75a331acc874033e98b2e1e03e/cm.tar.gz_2012-09-13'
2013-07-15 14:11:50,930 DEBUG           misc:615  Establishing handle
with key object 'shared/2012-09-17--19-47/cm_boot.py'
2013-07-15 14:11:50,930 DEBUG           misc:619  Copying file
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47/cm_boot.py'
to file 'cm-0479bd75a331acc874033e98b2e1e03e/cm_boot.py'
2013-07-15 14:11:51,085 DEBUG           misc:615  Establishing handle
with key object 'shared/2012-09-17--19-47/post_start_script'
2013-07-15 14:11:51,085 DEBUG           misc:619  Copying file
'cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47/post_start_script'
to file 'cm-0479bd75a331acc874033e98b2e1e03e/post_start_script'
2013-07-15 14:11:51,326 DEBUG           misc:574  Retrieved file
'persistent_data.yaml' from bucket
'cm-0479bd75a331acc874033e98b2e1e03e' on host 's3.amazonaws.com' to
'shared_p_d.yaml'.
2013-07-15 14:11:52,944 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.77
lx24-amd64    ']
2013-07-15 14:11:52,973 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:11:52,973 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:52,973 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:11:53,730 ERROR         master:1337 Error creating
volume from shared cluster's snapshot '['snap-cfa775ba']':
'filesystems'
2013-07-15 14:11:56,975 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:11:56,976 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:00,978 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:00,978 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:05,521 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.72
lx24-amd64    ']
2013-07-15 14:12:05,550 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:12:05,551 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:05,551 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:09,553 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:09,553 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:13,555 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:13,556 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:18,102 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.72
lx24-amd64    ']
2013-07-15 14:12:18,131 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:12:18,131 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:18,131 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:22,133 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:22,134 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:25,087 DEBUG            ec2:166  Gathering instance
public keys (i.e., key pairs), attempt 0
2013-07-15 14:12:25,091 DEBUG            ec2:173  Got key pair:
'cloudman_key_pair'
2013-07-15 14:12:26,136 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:26,137 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:30,689 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.72
lx24-amd64    ']
2013-07-15 14:12:30,717 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:12:30,717 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:30,718 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:34,719 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:34,720 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:38,721 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:38,721 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:43,263 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.65
lx24-amd64    ']
2013-07-15 14:12:43,289 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:12:43,290 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:43,290 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:47,292 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:47,292 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:51,293 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:51,293 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:55,836 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.65
lx24-amd64    ']
2013-07-15 14:12:55,865 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:12:55,865 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:55,866 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:12:59,867 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:12:59,868 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:13:03,868 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:13:03,869 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)
2013-07-15 14:13:08,419 DEBUG            sge:538  qstat:
['all.q@ip-10-235-1-48.ec2.inter BIP   0/0/2          0.65
lx24-amd64    ']
2013-07-15 14:13:08,448 DEBUG         master:2377 S&S:
Migration..Completed; SGE..OK; FS-transient_nfs..OK; PSS..Unstarted;
HTCondor..OK; Hadoop..OK;
2013-07-15 14:13:08,449 DEBUG         master:2288 Monitor adding service 'PSS'
2013-07-15 14:13:08,449 DEBUG            pss:95   Not adding PSS svc;
it completed (False) or the cluster was not yet initialized (None)


On Fri, Jul 12, 2013 at 12:08 PM, Enis Afgan <eafgan@emory.edu> wrote:
> Hi Greg,
> Sorry for replying really late.
>
> So, I'm guessing this was an old cluster that was shared and is now being
> derived on a new cluster? There was a large number of paths we explored
> while getting ready for the upgrade and I was of the opinion we covered that
> path but it seems things are not working as expected.
> Can look at the more detailed log on the Admin page (under CloudMan log) and
> see if there are more details about what's going on and why it's failing?
>
>
> On Thu, Jul 11, 2013 at 3:14 PM, greg <margeemail@gmail.com> wrote:
>>
>> Hi guys,
>>
>> I just thought I'd check in again.  None of the researches that want
>> to run out genotyping program can do so until I figure this out.  Any
>> help or advice at all would be greatly appreciated.
>>
>> Thanks,
>>
>> Greg
>>
>> On Mon, Jul 8, 2013 at 8:43 AM, greg <margeemail@gmail.com> wrote:
>> > Hi guys,
>> >
>> > Any thoughts on this?  I'm kind of stuck.
>> >
>> > (Even some pointers on where to look for more clues would be extremely
>> > helpful.)
>> >
>> > Thanks,
>> >
>> > Greg
>> >
>> > On Fri, Jul 5, 2013 at 11:10 AM, greg <margeemail@gmail.com> wrote:
>> >> Hi guys,
>> >>
>> >> I'm hitting an error using CloudMan using the Share-an-Instance
>> >> option.  It says:
>> >>
>> >> Error creating volume from shared cluster's snapshot
>> >> '['snap-cfa775ba']': 'filesystems'.
>> >>
>> >> Also disk stats says 0 /0 and the Applications light is yellow while
>> >> the data light is green.
>> >>
>> >> I'm using the share string
>> >> cm-808d863548acae7c2328c39a90f52e29/shared/2012-09-17--19-47
>> >>
>> >> It's always worked in the past.
>> >>
>> >> Thanks,
>> >>
>> >> Greg
>> >>
>> >> Here's the full log:
>> >>
>> >> 14:58:18 - Master starting
>> >> 14:58:20 - Completed the initial cluster startup process. This is a
>> >> new cluster; waiting to configure the type.
>> >> 14:58:24 - Migration service prerequisites OK; starting the service
>> >> 14:58:24 - SGE service prerequisites OK; starting the service
>> >> 14:58:31 - Setting up SGE...
>> >> 14:58:51 - HTCondor service prerequisites OK; starting the service
>> >> 14:58:51 - HTCondor config file /etc/condor/condor_config not found!
>> >> 14:58:59 - Hadoop service prerequisites OK; starting the service
>> >> 14:59:48 - Done adding Hadoop service; service running.
>> >> 15:01:45 - Error creating volume from shared cluster's snapshot
>> >> '['snap-cfa775ba']': 'filesystems'
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>
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