Dear all,
We implemented a system using soft-links to link
user-directories to NFS shares in order to import/link
datasets that are larger than 2GB (through links to
data-libraries) and provide our users with longer term
storage space for their analyses.
This worked fine for Galaxy version 17.09...and stopped
working for Version 18.05.
An example can be seen here in the folder (the path to
this folder will vary between installations):
/opt/galaxy/galaxy/database/files
lrwxrwxrwx 1 galaxy W190-htseq-bioinf 28 Sep 11
12:37
christopher.previti@dkfz-heidelberg.de ->
/galaxy-clients/w190_galaxy/
Setting the proper rights allows users to link files
from the nfs data-share make available under
/galaxy-clients (in this case the share is called
"w190_galaxy")
directly into a data-library (with the approriate
rights).
Would anybody have an idea why this doesn't work anymore
in v18.05?
Is it a galaxy.ini configuration issue?
Thanks for any advise you could provide!
Christopher
--
Dr. Christopher Previti
Genomics and Proteomics Core Facility
High Throughput Sequencing (W190)
Bioinformatician
German
Cancer Research Center (DKFZ)
Foundation under Public Law
Im Neuenheimer Feld 580
69120 Heidelberg
Germany
Room: B2.102 (INF580/TP3)
Phone: +49 6221 42-4661
christopher.previti@dkfz.de
www.dkfz.de
Management Board: Prof. Dr.
Michael Baumann, Prof. Dr. Josef Puchta
VAT-ID No.: DE143293537
Vertraulichkeitshinweis:
Diese Nachricht ist ausschließlich für die
Personen bestimmt, an die sie adressiert ist.
Sie kann vertrauliche und/oder nur für den/die
Empfänger bestimmte Informationen enthalten.
Sollten Sie nicht
der bestimmungsgemäße Empfänger sein, kontaktieren
Sie bitte den Absender und löschen Sie die
Mitteilung.
Jegliche unbefugte Verwendung der Informationen in
dieser Nachricht ist untersagt.
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: