It should be in your Galaxy installation directory, and your on-disk repositories will be in a directory under the setting you've defined for the "file_path" configuration in your community_wsgi.ini file. On Apr 2, 2012, at 10:17 AM, Joachim Jacob wrote:
Hi Greg,
If it is most likely a configuration error, I will check my settings, and let you know my progress.
But one note: I do not have a hgweb.config file. Where is it supposed to reside? I cannot find this info on the toolshed wiki.
Joachim
On 04/02/2012 03:30 PM, Greg Von Kuster wrote:
Hi Joachim,
I've not seen this in any of my tool shed development environments, nor using the test or main Galaxy tool sheds, so it is unlikely that this is a bug. It looks more likely to be a configuration problem in your local tool shed environment. Do the repositories defined in your hgweb.config match those you have on disk?
Greg Von Kuster
On Apr 2, 2012, at 8:38 AM, Joachim Jacob wrote:
Hi all,
On a local Toolshed freshly installed, I got these errors when browsing my repository.
Perhaps a bug?
Cheers, Joachim
Server Error
URL: http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories<http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories> Module paste.exceptions.errormiddleware:*143* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>app_iter *=* self*.*application*(*environ*,* start_response*)*| Module paste.debug.prints:*98* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>environ*,* self*.*app*)*| Module paste.wsgilib:*539* in |intercept_output| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>app_iter *=* application*(*environ*,* replacement_start_response*)*| Module paste.recursive:*80* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* self*.*application*(*environ*,* start_response*)*| Module paste.httpexceptions:*632* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* self*.*application*(*environ*,* start_response*)*| Module galaxy.web.framework.base:*160* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>body *=* method*(* trans*,* ****kwargs *)*| Module galaxy.webapps.community.controllers.repository:*985* in |browse_repositories| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* self*.*repository_list_grid*(* trans*,* ****kwd *)*| Module galaxy.web.framework.helpers.grids:*277* in |__call__| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>kwargs*=*kwargs *)*| Module galaxy.web.framework:*722* in |fill_template| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* self*.*fill_template_mako*(* filename*,* ****kwargs *)*| Module galaxy.web.framework:*733* in |fill_template_mako| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* template*.*render*(* ****data *)*| Module mako.template:*296* in |render| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* runtime*.*_render*(*self*,* self*.*callable_*,* args*,* data*)*| Module mako.runtime:*660* in |_render| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>****_kwargs_for_callable*(*callable_*,* data*)**)*| Module mako.runtime:*692* in |_render_context| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>_exec_template*(*inherit*,* lclcontext*,* args*=*args*,* kwargs*=*kwargs*)*| Module mako.runtime:*718* in |_exec_template| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>callable_*(*context*,* ***args*,* ****kwargs*)*| Module _base_mako:*42* in |render_body| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>__M_writer*(*unicode*(*next*.*body*(**)**)**)*| Module _grid_base_mako:*119* in |render_body| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>__M_writer*(*unicode*(*self*.*grid_body*(* grid *)**)**)*| Module _grid_base_mako:*790* in |render_grid_body| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>__M_writer*(*unicode*(*self*.*make_grid*(* grid *)**)**)*| Module _grid_base_mako:*819* in |render_make_grid| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>__M_writer*(*unicode*(*self*.*render_grid_table*(* grid*,* show_item_checkboxes *)**)**)*| Module _grid_base_mako:*768* in |render_render_grid_table| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>__M_writer*(*unicode*(*render_grid_table_body_contents*(* grid*,* show_item_checkboxes *)**)**)*| Module _grid_base_mako:*664* in |render_grid_table_body_contents| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*return* render_render_grid_table_body_contents*(*context*,*grid*,*show_item_checkboxes*)*| Module _grid_base_mako:*322* in |render_render_grid_table_body_contents| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>value *=* column*.*get_value*(* trans*,* grid*,* item *)*| Module galaxy.webapps.community.controllers.repository:*84* in |get_value| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>select_field *=* build_changeset_revision_select_field*(* trans*,* repository *)*| Module galaxy.webapps.community.controllers.common:*992* in |build_changeset_revision_select_field| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>repo *=* hg*.*repository*(* get_configured_ui*(**)**,* repository*.*repo_path *)*| Module galaxy.webapps.community.controllers.common:*757* in |get_configured_ui| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>_ui*.*setconfig*(* 'ui'*,* 'quiet'*,* True *)*| Module mercurial.ui:*113* in |setconfig| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>self*.*fixconfig*(**)*| Module mercurial.ui:*100* in |fixconfig| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>self*.*quiet *=* *not* self*.*debugflag *and* self*.*configbool*(*'ui'*,* 'quiet'*)*| Module mercurial.ui:*134* in |configbool| |>> <http://192.168.10.26:9009/repository/browse_repositories?webapp=community&operation=my_repositories#>*if* v*.*lower*(**)* *not* *in* _booleans*:*| *AttributeError: 'bool' object has no attribute 'lower' *
-- Joachim Jacob, PhD
Rijvisschestraat 120, 9052 Zwijnaarde Tel: +32 9 244.66.34 Bioinformatics Training and Services (BITS) http://www.bits.vib.be @bitsatvib
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