Greetings,

I’m trying to analyse a number of mouse RNA-seq samples on a local galaxy install. When trying to run cuffmerge and cuffcompare I get the following error.

No sequence data found for dbkey M_musculus_Ensembl_NCBIM37, so sequence data cannot be used.

The tool works fine with a human reference genome so im fairly confident I just fumbled a config file somewhere.

The problem is I been having difficulty locating exactly what file defines what sequence file is being used?

I looked through all my config files but so far I been unable to locate the error, could anyone possibly point me in the right direction?

Best Regards

Jonas Grauholm

AROS Applied Biotechnology A/S

SciencePark Skejby

Brendstrupgaardsvej 102

DK+8200 Aarhus N

Phone: +45 70271170