Galaxy Team:

I'm confused. This warning appears when I import an old workflow into
the latest version of galaxy-dist#stable.

As I interpret the first message, I see "galaxy has fastqc 0.3
installed, but the workflow was written with fastqc 0.52 and will need
to be updated to use the version 0.3 tool". This must be wrong, no?
Perhaps I'm installing tools from the wrong toolshed, but I would
expect the main galaxy toolshed to have *newer*, not older versions of
tools available as months progress. My guess is that your verbose
message needs to be polished.

If you look at the second attached screenshot, I believe that confirms
that I have fastqc 0.52 installed. In that case, you probably need to
tell users, "fastqc: using version '0.52' instead of version '0.3'
indicated in this workflow." (note that the version strings are
swapped). Perhaps add a bit more to the message to avoid confusion.

Cheers,

-Evan Bollig
Research Associate | Application Developer | User Support Consultant
Minnesota Supercomputing Institute
599 Walter Library
612 624 1447
evan@msi.umn.edu
boll0107@umn.edu

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