Hi,

 

base:

os:centos6.4

torque:4.2.7

 

I built a glaxy cluster today,and then I found the job completion status of torque queue is 'c',but the need state of galalxy is "ok".So I modified the torque.py file and solved this error. I do, right?

 

 

diff -r 8411a9f30feb lib/galaxy/jobs/runners/cli_job/torque.py

--- a/lib/galaxy/jobs/runners/cli_job/torque.py Thu Dec 19 14:38:03 2013 -0500

+++ b/lib/galaxy/jobs/runners/cli_job/torque.py Fri Feb 28 13:02:48 2014 +0800

@@ -117,6 +117,8 @@

                 if id in job_ids:

                     state = job.find('job_state').text

                     # map PBS job states to Galaxy job states.

+                    if state == u'C' :

+                        state = 'ok'

                     rval[id] = self.__get_job_state(state)

         return rval