Hi, Erick - thanks for pointing this out - I just added it back to galaxy-central.
On Thu, Nov 18, 2010 at 10:00 AM, Erick Antezana
<erick.antezana@gmail.com> wrote:
Hi,
I just updated my local instance and it seems that the hapmapmart.xml
is missing in the repository?
galaxy.tools ERROR 2010-11-18 15:55:48,570 error reading tool from
path: data_source/hapmapmart.xml
Traceback (most recent call last):
File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/tools/__init__.py",
line 77, in load_tool
tool = self.load_tool( os.path.join( self.tool_root_dir, path ) )
File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/tools/__init__.py",
line 131, in load_tool
tree = util.parse_xml( config_file )
File "/tools/shared/bioinfo/app/galaxy/dev/lib/galaxy/util/__init__.py",
line 102, in parse_xml
tree = ElementTree.parse(fname)
File "/tools/shared/bioinfo/app/galaxy/dev/eggs/elementtree-1.2.6_20050316-py2.6.egg/elementtree/ElementTree.py",
line 859, in parse
tree.parse(source, parser)
File "/tools/shared/bioinfo/app/galaxy/dev/eggs/elementtree-1.2.6_20050316-py2.6.egg/elementtree/ElementTree.py",
line 576, in parse
source = open(source, "rb")
IOError: [Errno 2] No such file or directory:
'./tools/data_source/hapmapmart.xml'
thanks,
Erick
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