Hi Greg/Dave, I've noticed an oddity with another unit test failure on the main Tool Shed, http://toolshed.g2.bx.psu.edu/view/peterjc/get_orfs_or_cdss Revision: 1:922d69bd5258 Tool id: get_orfs_or_cdss version: 0.0.2 Reason test is invalid One or more test files are missing for tool get_orfs_or_cdss: Ssuis.fasta The tool tests should be failing as they are omitting some test files, which I'd not included in the uploaded tar ball (I'll fix this shortly): test-data/get_orf_input.fasta test-data/get_orf_input.Suis_ORF.nuc.fasta test-data/get_orf_input.Suis_ORF.prot.fasta test-data/get_orf_input.t11_nuc_out.fasta test-data/get_orf_input.t11_open_nuc_out.fasta test-data/get_orf_input.t11_open_prot_out.fasta test-data/get_orf_input.t11_prot_out.fasta test-data/get_orf_input.t1_nuc_out.fasta test-data/get_orf_input.t1_prot_out.fasta However, I believe the ToolShed warning is misleading as test-data/Ssuis.fasta is already present as part of the Galaxy core install. This is why I have used it (and other bundled files like it) to minimise the download size of the tool itself. Thanks, Peter