Hi Curtis,
setup.sh has been removed from the installation process, as discussed in this thread: http://lists.bx.psu.edu/pipermail/galaxy-dev/2011-March/004588.html

On Wed, Mar 9, 2011 at 2:12 PM, Curt Palm <cpalm@stanford.edu> wrote:
I just cloned the current release version of  galaxy:

hg clone http://bitbucket.org/galaxy/galaxy-dist

and can not run setup.sh because it is not present in  the /galaxy-dist/ directory.

setup.sh is also not listed on the https://bitbucket.org/galaxy/galaxy-dist/src   page,

is this an error or has the installation process changed?

thanks

*******************************************************
Curtis J. Palm             cpalm@stanford.edu
Stanford Genome Technology Center

MC:  8307
office: 650-812-1994        cell: 408 858-7849
*******************************************************


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