18 Nov
2014
18 Nov
'14
4:49 a.m.
On Mon, Nov 17, 2014 at 7:23 PM, John Chilton <jmchilton@gmail.com> wrote:
Ummm... I think it is that the VM started shipping with an incompatible paramkio.
[...]
Anyway - planemo's TravisCI integration tests Galaxy in a virtualenv and it works fine [...]
That's a useful workaround, but a virtualenv is not viable for existing Galaxy installations - which may also come to have this problem if their system copy of paramiko is updated? I'm not familiar with paramiko or markupsafe, but if there is a conflict it would be good to have a direct fix. Peter