I’m trying to install VarScan from the Main Toolshed. I’ve tried both the versions available (‘varscan’ from fcaramia and ‘varscan_version_2’ from devteam), but I get the same error each time:
File "/tsl/services/galaxy/dist/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/install_util.py", line 294, in install_and_build_package_via_fabric fabric_util.install_and_build_package( app, tool_dependency, actions_dict )
File "/tsl/services/galaxy/dist/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py", line 619, in install_and_build_package destination=full_path_to_dir )
File "/usr/lib64/python2.6/contextlib.py", line 34, in __exit__ self.gen.throw(type, value, traceback)
File "/tsl/services/galaxy/dist/galaxy-dist/eggs/Fabric-1.7.0-py2.6.egg/fabric/context_managers.py", line 142, in _setenv yield
File "/tsl/services/galaxy/dist/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/fabric_util.py", line 309, in install_and_build_package dir = td_common_util.url_download( work_dir, downloaded_filename, url, extract=True )
File "/tsl/services/galaxy/dist/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/td_common_util.py", line 434, in url_download archive = CompressedFile( file_path )
File "/tsl/services/galaxy/dist/galaxy-dist/lib/tool_shed/galaxy_install/tool_dependencies/td_common_util.py", line 27, in __init__ self.type = self.file_type 'CompressedFile' object has no attribute 'file_type'