[galaxy-dev] Galaxy in a frame?

Dear All, We are trying to integrate Galaxy with our web app, and we thought of having our web app as the main front end, and allow users to open an HTML frame with Galaxy in it within that app. However, Galaxy makes it impossible - it takes over the entire page when a user logs in or clicks on most links. Is it possible to embed Galaxy in another webapp or is it only designed as a standalone app? Thanks so much, Oren