26 Oct
2011
26 Oct
'11
5:06 a.m.
Hi Ross, I checked the following: wget <link> works, I can download the file. It's not saved as <Historyname>.tar.gz but as "export_archive?id=a69ee3e00cb4d02c". Anyway, I can unpack the archive with tar xfvz. hg head: Änderung: 5955:949e4f5fa03a Marke: tip Nutzer: Nate Coraor <nate@bx.psu.edu> Datum: Mon Aug 29 14:42:04 2011 -0400 Zusammenfassung: Missing import in library_contents.py Where can I find the file (I assume?) paster.log? On 25.10.2011 12:19, Ross wrote: > Sorry to hear it's not working for you - that link definitely did work > to an Australian Galaxy server behind a relatively tight and fussy > firewall. > > Suggestions: check that it's not a local firewall problem - eg try > wget http://main.g2.bx.psu.edu/history/export_archive?id=735329393657ab63 > or on the same link you're trying to import - it's just an archive. > > If that works, then maybe check for an old version of the code your > Galaxy is running? > eg what does: > > hg head > > show from the root of the installation that's failing to import? > > Is there anything interesting in paster.log after you start an import > job that never finishes? > > On Tue, Oct 25, 2011 at 9:02 PM, Stefanie Ververs > <stefanie.ververs@fh-stralsund.de> wrote: >> Hi Ross, >> >> that is exactly what I tried - "Export to file" and then enter the link into >> "Import from File". >> But the History never appears in the account on our Galaxy :( >> It works between different accounts on main, but not from main to our's.. >> >> >> Am 25.10.2011 11:58, schrieb Ross: >>> Hi, Stefanie. >>> >>> I think you might want a URL pointing to an "archived history" if you >>> want to move your history to a different Galaxy? >>> >>> I imported your test history into my account on main, then I used the >>> 'export to file' option (it might not be optimally named since it >>> really creates an importable archive) - main returned: >>> >>> "Exporting History 'imported: Neue History zum Test'. Use this link to >>> download the archive or import it to another Galaxy server: >>> http://main.g2.bx.psu.edu/history/export_archive?id=735329393657ab63 >>> >>> I just successfully imported from that URL to a private Galaxy and it >>> all looks right. >>> >>> >>> On Tue, Oct 25, 2011 at 6:48 PM, Stefanie Ververs >>> <stefanie.ververs@fh-stralsund.de> wrote: >>>> Am 24.10.2011 21:05, schrieb Jeremy Goecks: >>>>>> So - I'm logged in and the link is accessible. >>>>>> (I tried with different accounts on the public server - that works; but >>>>>> not importing to our own instance.) >>>>> The history must be "Accessible via link": Options --> Share/Publish >>>>> --> >>>>> Make History Accessible via Link >>>>> >>>>> Can you share the history with me? >>>>> >>>>> Thanks, >>>>> J. >>>> I tried it, following your instructions. >>>> And different follow-ups: >>>> 1) Pasting the "sharing"-Link into the "Import a History from an Archive" >>>> field -> doesn't work >>>> 2) Opening the link being logged in to the account on OUR instance, that >>>> means, the target account, but NOT on the source account. -> doesn't >>>> work - >>>> he tries to import the history on the public server (I assume because the >>>> message was about "this will delete your current history") >>>> >>>> When I imported histories from one account to another on the public >>>> server, >>>> I never used "Make History Accessible via Link". I just took the >>>> export-Link >>>> (the one you can download the history as an archive file.) >>>> I even tried uploading the file somewhere else. >>>> >>>> This is my test-History: >>>> http://main.g2.bx.psu.edu/u/stef85/h/neue-history-zum-test >>>> >>>> Steffi >> > >