Hello, Phillip

I haven't been able to replicate this yet (https://trello.com/c/LdLlJDo9). Do you see any errors in your log near or after "GET /history/list HTTP/1.1"?

Shane Sturrock worked around this problem by updating his universe_wsgi.ini file (if I understand his procedure):

1. Make a backup of your universe_wsgi.ini file (for example, copy it to your home directory)

2. Rename the universe_wsgi.ini file in your galaxy installation something like 'universe_wsgi.ini.saved'

3. Rename the most recent universe_wsgi.ini.sample file (that came with the latest update) to universe_wsgi.ini.

4. Copy any custom settings for your server from your older universe_wsgi.ini.saved file to the newer universe_wsgi.ini file

5. Start Galaxy

That seemed to work for Shane. Ambrose re-installed and reconnected his database. Neither is a solution to the original cause, but you may want to try them while we investigate.

Thanks,

Carl

On Thu, Jul 11, 2013 at 5:48 AM, Groot, Philip de <philip.degroot@wur.nl> wrote:

Hi,

First of all, I apologize for interrupting into this discussion, but I have exactly the same problem and did not find a solution yet. And no: prefix and cookies are set properly in our particular setting (as "/")! This is not the cause...

I think that the problem occurred with the May Galaxy update, but it was unnoticed for a while. Problem is that the histories of all users are not listed when being asked for it within Galaxy. Only the current history is present for every user. In addition, when I login using another computer, a different history is being depicted (which suggest a cookie issue but I just cannot find it). Copying the current history works but the copy is not listed either.

In the postgres database, the histories are properly listed. If I type in the proper history name in Galaxy, I even get the stored history back! So this all works, but users cannot see their histories. The java console does not reveal any problem. prefix and cookie are set properly (I think). So I don't know. Does anyone have any clue on how to tackle this issue? I am happy to provide more information if needed!

Thanks!

Dr. Philip de Groot Ph.D.
Bioinformatics Researcher

Wageningen University / TIFN
Nutrigenomics Consortium
Nutrition, Metabolism & Genomics Group
Division of Human Nutrition
PO Box 8129, 6700 EV Wageningen
Visiting Address: Erfelijkheidsleer: De Valk, Building 304
Dreijenweg 2, 6703 HA Wageningen
Room: 0052a
T: +31-317-485786
F: +31-317-483342
E-mail: Philip.deGroot@wur.nl<mailto:Philip.deGroot@wur.nl>
Internet: http://www.nutrigenomicsconsortium.nl<http://www.nutrigenomicsconsortium.nl/>
http://humannutrition.wur.nl/
https://madmax.bioinformatics.nl/