details: http://www.bx.psu.edu/hg/galaxy/rev/76759e07013b changeset: 2714:76759e07013b user: Anton Nekrutenko anton@bx.psu.edu date: Fri Sep 18 11:11:41 2009 -0400 description: small tweaks
2 file(s) affected in this change:
tools/metag_tools/split_paired_reads.xml tools/sr_mapping/bowtie_wrapper.xml
diffs (26 lines):
diff -r 5ffb934ab613 -r 76759e07013b tools/metag_tools/split_paired_reads.xml --- a/tools/metag_tools/split_paired_reads.xml Fri Sep 18 10:40:53 2009 -0400 +++ b/tools/metag_tools/split_paired_reads.xml Fri Sep 18 11:11:41 2009 -0400 @@ -7,8 +7,8 @@ <param name="input" type="data" format="fastqsolexa,fastqsanger" label="Your paired-end file" /> </inputs> <outputs> - <data name="output1" format="fastqsolexa"/> - <data name="output2" format="fastqsolexa"/> + <data name="output1" format="input"/> + <data name="output2" format="input"/> </outputs> <tests> <test> diff -r 5ffb934ab613 -r 76759e07013b tools/sr_mapping/bowtie_wrapper.xml --- a/tools/sr_mapping/bowtie_wrapper.xml Fri Sep 18 10:40:53 2009 -0400 +++ b/tools/sr_mapping/bowtie_wrapper.xml Fri Sep 18 11:11:41 2009 -0400 @@ -275,7 +275,7 @@ <param name="input1" type="data" format="fastqsanger" label="Forward FASTQ file" /> <param name="input2" type="data" format="fastqsanger" label="Reverse FASTQ file" /> <conditional name="params"> - <param name="settings_type" type="select" label="BWA settings to use" help="For most mapping needs use Commonly used settings. If you want full control use Full parameter list"> + <param name="settings_type" type="select" label="Bowtie settings to use" help="For most mapping needs use Commonly used settings. If you want full control use Full parameter list"> <option value="pre_set">Commonly used</option> <option value="full">Full parameter list</option> </param>