Hello Marion,
To use this genome immediately, it is best to use it as a custom reference genome. This is how: https://galaxyproject.org/learn/custom-genomes/
To have it reviewed for inclusion at Galaxy Main as a natively indexed genome, please add a comment to this master genome request ticket. Include the build details and a link to a public repository (NCBI, etc) that hosts the genome data. Details here: https://github.com/galaxyproject/galaxy/issues/1470
Thanks!
To whom it concerns,
I am Marion Cerri, post doc in the Parniske’s lab, in Munich. I am working with ChIP-seq data in the moment.
I would like to use the Lotus japonicus (version 3.0) for mapping reads, but the genome is not available on galaxy. Would it be possible to upload it ? Do I have to provide the file to you, and if so in fasta format ?
Thanks in advance
Best Regards
Marion Cerri
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