Hi guys,

 

when I try to run "Filter SAM or BAM, output SAM or BAM" from SAMtools on our local galaxy instance, we get this error:

 

Traceback (most recent call last):

  File "/home/jvdelarosa/Bioinformatica/Software/galaxy/lib/galaxy/jobs/runners/__init__.py", line 166, in prepare_job

    job_wrapper.prepare()

  File "/home/jvdelarosa/Bioinformatica/Software/galaxy/lib/galaxy/jobs/__init__.py", line 889, in prepare

    self.command_line, self.extra_filenames, self.environment_variables = tool_evaluator.build()

  File "/home/jvdelarosa/Bioinformatica/Software/galaxy/lib/galaxy/tools/evaluation.py", line 442, in build

    raise e

ValueError: invalid literal for int() with base 16: ''

 

Enviado desde Correo para Windows 10