Hi,

Do you still have the config/galaxy.ini.sample file unchanged ?

We observed this message when some .sample are missing or were modified.

Gildas

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Gildas Le Corguillé - Bioinformatician/Bioanalyste

Plateform ABiMS (Analyses and Bioinformatics for Marine Science)
http://abims.sb-roscoff.fr

Member of the Workflow4Metabolomics project

http://workflow4metabolomics.org

Station Biologique de Roscoff - UPMC/CNRS - FR2424
Place Georges Teissier 29680 Roscoff FRANCE
tel: +33 2 98 29 23 81
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Le 3 mars 2016 à 07:31, Léo Biscassi <leo.biscassi@gmail.com> a écrit :

Hi, the command that you suggested not working, the same output is presented. I tested with the following commands:

sudo planemo test /home/leobiscassi/programs/galaxy/tools/planemo-tutorial/seqtk_seq.xml --galaxy_root=/home/leobiscassi/programs/galaxy

sudo planemo test /home/leobiscassi/programs/galaxy/tools/planemo-tutorial/seqtk_seq.xml

What is the influence of xUnit file in the process? I did the question because the warning message showing "Cannot locate xUnit report option for tests - update Galaxy for more detailed breakdown".

P.S.: My Galaxy instance is the latest stable version.

Best regards,

On Thu, Mar 3, 2016 at 2:53 AM Björn Grüning <bjoern.gruening@gmail.com> wrote:

Hi,

maybe I'm mistaken something, its way to early here ... but you need to
specify a path to the tool you want to test.

For example:

planemo test /foo/bar/foo.xml

or to a directory full of tools.

planemo test /foo/bar

Hope this helps,
Bjoern

Am 03.03.2016 um 04:48 schrieb Léo Biscassi:
> Hi Folks,
> I tried follow this tutorial [1], but I have problems in execute the
> command "planemo t --galaxy_root=/home/leobiscassi/programs/galaxy" for
> perform functional tests, any suggestion?
> Bellow some images about this problem:
>
> imagem1.jpg
> *Figure 1: *Command
>
> imagem2.jpg
> *Figure 2:* Error
>
> imagem3.jpg
> *Figure 3: *Galaxy Path
>
> Planemo's version is 0.23.0.
>
> [1] https://planemo.readthedocs.org/en/latest/writing_standalone.html
>
> P.S: The command is utilized for same tool presented in tutorial.
>
> Att.
> --
> *Léo Biscassi*
> Facebook - https://pt-br.facebook.com/lbiscassi
> Linkedin - https://br.linkedin.com/in/leobiscassi
> Skype - biscassi.leo
> Twitter - https://twitter.com/leobiscassi
>
>
> ___________________________________________________________
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-- 

Léo Biscassi

Facebook - https://pt-br.facebook.com/lbiscassi

Linkedin - https://br.linkedin.com/in/leobiscassi

Skype - biscassi.leo

Twitter - https://twitter.com/leobiscassi

___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
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 https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
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