When do you see this error? When importing the workflow, running it, editing it? Peter On Mon, Mar 24, 2014 at 2:45 PM, Björn Grüning <bjoern.gruening@gmail.com> wrote:
Hi,
anyone saw that error already and has a fix or workaround? It happens with:
http://toolshed.g2.bx.psu.edu/view/peterjc/secreted_protein_workflow
http://toolshed.g2.bx.psu.edu/view/galaxyp/proteomics_rnaseq_splice_db_workf...
Error - <type 'exceptions.AttributeError'>: 'NoneType' object has no attribute 'iteritems' URL: http://galaxy.uni-freiburg.de/workflow/load_workflow?id=a1f33a6ea049e40d&_=1395671420039 File '/usr/local/galaxy/galaxy-dist/lib/galaxy/web/framework/middleware/error.py', line 149 in __call__ app_iter = self.application(environ, sr_checker) File '/usr/local/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/recursive.py', line 84 in __call__ return self.application(environ, start_response) File '/usr/local/galaxy/galaxy-dist/eggs/Paste-1.7.5.1-py2.7.egg/paste/httpexceptions.py', line 633 in __call__ return self.application(environ, start_response) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 132 in __call__ return self.handle_request( environ, start_response ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 190 in handle_request body = method( trans, **kwargs ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line 78 in decorator return to_json_string( func( self, trans, *args, **kwargs ) ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/workflow.py', line 686 in load_workflow module = module_factory.from_workflow_step( trans, step ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/workflow/modules.py', line 443 in from_workflow_step return self.module_types[type].from_workflow_step( trans, step ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/workflow/modules.py', line 251 in from_workflow_step module.state.inputs = module.tool.params_from_strings( step.tool_inputs, trans.app, ignore_errors=True ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/tools/__init__.py', line 2421 in params_from_strings return params_from_strings( self.inputs, params, app, ignore_errors ) File '/usr/local/galaxy/galaxy-dist/lib/galaxy/tools/parameters/__init__.py', line 98 in params_from_strings for key, value in param_values.iteritems(): AttributeError: 'NoneType' object has no attribute 'iteritems'
Cheers, Bjoern ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
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