Thanks for the tip. I have already done this but not via galaxy toolshed (always good to learn new stuff). I didn&#39;t get any answers so far, so I hoped to be luckier on the dev list.<div>Thanks again for quick reply.<br>
<br><div class="gmail_quote">2012/11/8 Greg Von Kuster <span dir="ltr">&lt;<a href="mailto:greg@bx.psu.edu" target="_blank">greg@bx.psu.edu</a>&gt;</span><br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="word-wrap:break-word">Hi Phillippe,<div><br></div><div>You may have better luck in getting a response to this if you contact the owner of the repository you installed from the tool shed.  See this wiki page for details on how to do this.</div>
<div><br></div><div><a href="http://wiki.galaxyproject.org/ToolShedRepositoryFeatures#Contacting_the_owner_of_a_repository" target="_blank">http://wiki.galaxyproject.org/ToolShedRepositoryFeatures#Contacting_the_owner_of_a_repository</a></div>
<div><br></div><div>Greg Von Kuster</div><div><br></div><div><br><div><div><div class="h5"><div>On Nov 7, 2012, at 6:29 PM, Philipe Moncuquet wrote:</div><br></div></div><blockquote type="cite"><div><div class="h5">Hi developers,<div>
<br></div><div>We have our own instance running and under continuoius development.</div><div>I installed velvetg and velveth from the toolshed (revision <a href="http://toolshed.g2.bx.psu.edu/repository/view_changelog?id=9dca5b8f68c509af" style="line-height:16px;color:rgb(48,48,48);font-size:12px;font-family:&#39;Lucida Grande&#39;,verdana,arial,helvetica,sans-serif" target="_blank">0:4afe13ac23b6</a>) and manually installed binaries for velvet_1.2.08.</div>

<div>When I try to test it under the galaxy web interface, the job does not failed but all files are empty except the first one that contains the following error message :</div><div><pre style="word-wrap:break-word;white-space:pre-wrap">
[0.000000] Unknown option: -ins_length3</pre><pre style="word-wrap:break-word"><font face="arial"><span style="white-space:normal">I guess this might come from the version of the binaries and the version the xml wrapper was written for are different. Does anyone knows which binaries version I should use ?</span></font></pre>

<pre style="word-wrap:break-word"><font face="arial"><span style="white-space:normal">How is it that the job does not appears as failed ? Any help will greatly appreciated.</span></font></pre><pre style="word-wrap:break-word">
<font face="arial"><span style="white-space:normal">Regards,</span></font></pre><pre style="word-wrap:break-word"><font face="arial"><span style="white-space:normal">Philippe</span></font></pre></div></div></div>
___________________________________________________________<br>Please keep all replies on the list by using &quot;reply all&quot;<br>in your mail client.  To manage your subscriptions to this<br>and other Galaxy lists, please use the interface at:<br>
<br>  <a href="http://lists.bx.psu.edu/" target="_blank">http://lists.bx.psu.edu/</a></blockquote></div><br></div></div></blockquote></div><br></div>