Hi there, I have a local copy of galaxy and I am trying to install bowtie2 2.1.0 onto the system via the toolshed. However it just doesn't work. I always get a Server Error message. I have checked if the dependencies are installed and they are all installed in the toolshed depenencies folders. However, the actual repos only contains the tool_dependency.xml. (eg galaxy/shed_tools/ testtoolshed.g2.bx.psu.edu/repos/jjohnson/package_bowtie_2_1_0/38652b57e057/package_bowtie_2_1_0/tool_dependencies.xml ) I thought that there should be a bowtie2.xml file in the repos of package_bowtie_2_1_0 but there isn't... Also, looking at the shed_tool_config.xml I cannot see any entry for bowtie2. Is there a way to add bowtie2 manually? Best wishes, Alex