Hi,
I'm trying to get the example_watch_folder.py to run but it seems to fail, and I'm not sure why?
I run:
./example_watch_folder.py 64f3209856a3cf4f2d034a1ad5bf851c http://barium-rbh/csiro/api/ /home/galaxy/galaxy-drop/input /home/galaxy/galaxy-drop/output "My API Import" f597429621d6eb2b
I got the workflow Id from :
http://barium-rbh/csiro/api/workflows
which gave me:
[
{
"id": "f597429621d6eb2b",
"name": "extract",
"url": "/csiro/api/workflows/f597429621d6eb2b"
},
{
"id": "f2db41e1fa331b3e",
"name": "FULL CTE",
"url": "/csiro/api/workflows/f2db41e1fa331b3e"
}
]
The output I get from the command line is:
{'outputs': ['ba0fa2aed4052bce'], 'history': 'ba03619785539f8c'}
The files I put into /home/galaxy/galaxy-drop/input get copied to /home/galaxy/galaxy-drop/output
But nothing else happens.
If I go to http://barium-rbh/csiro/api/histories
I can see:
{
"id": "ba03619785539f8c",
"name": "colin.nii.gz - extract",
"url": "/csiro/api/histories/ba03619785539f8c"
},
However when I go to:
http://barium-rbh/csiro/api/histories/ba03619785539f8c
I get:
{
"contents_url": "/csiro/api/histories/ba03619785539f8c/contents",
"id": "ba03619785539f8c",
"name": "colin.nii.gz - extract",
"state": "error",
"state_details": {
"discarded": 0,
"empty": 0,
"error": 1,
"failed_metadata": 0,
"new": 0,
"ok": 0,
"queued": 0,
"running": 0,
"setting_metadata": 0,
"upload": 0
}
}
Any ideas much appreciated
Thanks
Neil