On Mon, May 21, 2012 at 4:17 AM, julie dubois <
dubjulie@gmail.com> wrote:
> Hi,
> Thanks for your answer.
> Effectively it's not necessary on integrating Galaxy with a third party
> authentication system.
> I've integrated my configuration to the file "default" and it's work !
>
> Just one remark. I've configured the file ports.conf with the line :
> "Listen 8080", and it didn't work!
> In fact, the shell says me that the galaxy port was already in use while the
> command lsof -ti : 8080 showed no result.
> And when I delete the line "listen 8080" of my file ports.conf, Galaxy work!
> Is it normal ?
>
> Finally, if I want tu use the proxy balancer lines like this (it is in the
> hope to increase performances):
> <Proxy balancer://galaxy>
> Balancer member...
> ...
> </Proxy>
>
> must I add in default file (and before or after the rewrite rules?) or in an
> other file ?
>
> Thank you in advance.
> Julie
>
> 2012/5/18 Carlos Borroto <
carlos.borroto@gmail.com>
>>
>> Hi Julie,
>>
>> Could you answer a couple of questions?
>>
>> First, are you interested on integrating Galaxy with a third party
>> authentication system?
>>
>> Second, do you expect heavy usage(I would say hundreds of concurrent
>> users) where you would need several Galaxy servers with the work load
>> balanced amount them?. Note even if you only have one Galaxy server,
>> you will still have several Apache processes running and you will be
>> able to serve multiple concurrent users without issue. Well at least
>> from the web server side of things, if you expect even a moderate
>> usage you should use a database back-end like PostgreSQL or MySQL.
>>
>> If the answer to these questions is no, all you need in a
>> Debian/Ubuntu system is to place this in
>> '/etc/apache2/sites-available/default' file between the <VirtualHost>
>> tags:
>> RewriteEngine on
>> RewriteRule ^/static/style/(.*)
>> /home/nate/galaxy-dist/static/june_2007_style/blue/$1 [L]
>> RewriteRule ^/static/scripts/(.*)
>> /home/nate/galaxy-dist/static/scripts/packed/$1 [L]
>> RewriteRule ^/static/(.*) /home/nate/galaxy-dist/static/$1 [L]
>> RewriteRule ^/favicon.ico /home/nate/galaxy-dist/static/favicon.ico [L]
>> RewriteRule ^/robots.txt /home/nate/galaxy-dist/static/robots.txt [L]
>> RewriteRule ^(.*) http://localhost:8080$1 [P]
>>
>> Even if the answer if yes to both questions, I would start with the
>> simpler setup first, get it working and then grow from there.
>>
>> Hope it helps,
>> Carlos
>>
>> On Fri, May 18, 2012 at 6:59 AM, julie dubois <
dubjulie@gmail.com> wrote:
>> > Hi,
>> > First, Sorry but, I'm a newbie with Apache and my questions will
>> > certainly
>> > appear stupid.
>> >
>> > To configure apache2, I've followed this wiki :
>> >
http://wiki.g2.bx.psu.edu/Admin/Config/Apache%20Proxy
>> > And I write these instructions :
>> >
>> > <Proxy
http://localhost:8080>
>> > Order deny,allow
>> > Allow from all
>> > </Proxy>
>> > RewriteEngine on
>> > <Location "/">
>> > # Define the authentication method
>> > AuthType Basic
>> > AuthName Galaxy
>> > AuthUserFile /home/nate/htpasswd
>> > Require valid-user
>> > # Take the $REMOTE_USER environment variable and set it as a header
>> > in
>> > the proxy request.
>> > RewriteCond %{IS_SUBREQ} ^false$
>> > RewriteCond %{LA-U:REMOTE_USER} (.+)
>> > RewriteRule . - [E=RU:%1]
>> > RequestHeader set REMOTE_USER %{RU}e
>> > </Location>
>> > RewriteRule ^/static/style/(.*)
>> > /home/nate/galaxy-dist/static/june_2007_style/blue/$1 [L]
>> > RewriteRule ^/static/(.*) /home/nate/galaxy-dist/static/$1 [L]
>> > RewriteRule ^/favicon.ico /home/nate/galaxy-dist/static/favicon.ico [L]
>> > RewriteRule ^/robots.txt /home/nate/galaxy-dist/static/robots.txt [L]
>> > RewriteRule ^(.*) http://localhost:8080$1 [P]
>> > </Location>
>> >
>> >
>> >
>> > But several problems appeared when I launched my Galaxy.
>> >
>> >
>> > First, must this instructions block be in the file apache2.conf or in
>> > the
>> > file default of sites-available directory ?
>> > If it must be in the file default, is it between the <VirtualHost> tags
>> > or
>> > out of these tags ?
>> >
>> > Second, I've created an htpaswd file in my home directory, but when I
>> > launch
>> > galaxy, it doesn't request me a login and password but it says me that
>> > Galaxy requires an user authentification and it must be an error in my
>> > apache configuration.
>> > Is it a problem with the instructions or with their place in
>> > configuration
>> > file ?
>> >
>> > Third the line </Location> appears two times in your instructions but
>> > it's
>> > wrong for apache. I've deleted the first but I'm note sure that Rewrite
>> > instructions must be in the <Location> block.
>> >
>> > And finally, I want to work with severals web processes and I want to
>> > add
>> > this configuration lines :
>> >
>> > <Proxy balancer://galaxy>
>> > ...
>> > </Proxy>
>> >
>> > Must I add to previous lines and where ? or Must I replace certain lines
>> > of
>> > previous block and if yes : which lines ?
>> >
>> > Thank you very much.
>> >
>> > Julie
>> >
>> > ___________________________________________________________
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>> >
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>
>