Il giorno lun, 11/02/2013 alle 13.19 +0000, Peter Cock ha scritto:
On Fri, Feb 8, 2013 at 4:30 PM, Nicola Soranzo <soranzo@crs4.it> wrote:
Il giorno mer, 06/02/2013 alle 20.01 +0100, Nicola Soranzo ha scritto:
Hi Peter, I added these file formats mostly as placeholders for a future implementation. Now I have changed a bit the tool by removing acclist and seqloc_xml formats since they are not recognized by the last versions of dustmasker (I also sent an email to blast-help@ncbi.nlm.nih.gov to inform them of this bug). As before, you can find the new version at:
https://bitbucket.org/nsoranzo/ncbi_blast_plus
I stripped the old commit and did a new one, not a very good practice, sorry about that.
It seems to have confused the bitbucket page a little, but I have checked in your initial wrapper to my development repository (I use the tools branch): https://bitbucket.org/peterjc/galaxy-central/commits/2284d485e36f74f19b0dbe7...
Note I'm not going to include this in the Tool Shed release yet, we need to sort out the file format definitions first.
Hi Peter, I implemented minimal datatypes for maskinfo ASN.1 binary and text, plus some other improvements to ncbi_blast_plus, and I sent you a pull request through Bitbucket for your development repository. I think that would be easier for you, let me know if it is not. Nicola