On Nov 14, 2011, at 3:54 AM, remy d1 wrote:
Hello,
In my configuration, I submit job through SGE. I have a cluster in the backend. If nodes are shutdown job is in state "queue wait" and I noticed that it disappear sometime. Is there a timeout somewhere in galaxy which is monitoring jobs ? In fact, I whish to use a script in SGE which is halting or booting nodes according to the SGE queue.
Hi Rem, Galaxy interfaces with the queue much like qstat does. There should be no timeout, it will simply continue to poll for the state of jobs until they are in a terminal state (or are no longer listed in the list of jobs currently known by SGE). --nate
-Regards Rem. ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: