Hi Kanwei,
I think we'll get more feedback once it when it is added to Galaxy. I have run small tests (included in the functional tests) and real large datasets and have had no issues with the scripts and wrappers.
Regards,
Florent
On 27/05/11 18:49, Kanwei Li wrote:Has anyone on the list tried this patch? Feedback would be appreciated.
Thanks,
K
On Fri, May 27, 2011 at 1:27 AM, Florent Angly <florent.angly@gmail.com> wrote:
Can anyone comment on my email please?
Florent
On 22/05/11 14:03, Florent Angly wrote:Let me know if you have any questions about this.
Thanks,
Florent
-------- Original Message --------
Subject: Request for pulling the updated FASTQ (de-)interlacer tool Date: Tue, 17 May 2011 17:47:13 +1000 From: Florent Angly <florent.angly@gmail.com> To: galaxy-dev@lists.bx.psu.edu <galaxy-dev@lists.bx.psu.edu>
Dear Galaxy team, Please consider pulling these changes I made to the interlacer/de-interlacer tools into the main Galaxy repository: https://bitbucket.org/fangly/galaxy-central/changeset/7f7ec8f05d36 While the tools were handling mate pairs fine, I now added the ability to also keep single reads (reads that miss their mate) in a separate file. The functional tests were updated and pass. Thanks, Florent
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