Re: [galaxy-dev] Update on Megablast?

On Fri, Mar 23, 2012 at 4:36 PM, Luobin Yang <yangluob@isu.edu> wrote:

I've noticed these wrappers for BLAST+. I actually was talking about the megablast tool under NGS Mapping section...

Thanks, Luobin

Oh - you mean update it to use BLAST+ instead of legacy BLAST internally? I asked about this too before writing the BLAST+ wrappers and one major concern was about breaking reproducibility - the newer BLAST doesn't give identical results. http://lists.bx.psu.edu/pipermail/galaxy-dev/2010-September/003342.html Also everything the megablast wrapper offers and more is in the blastn wrapper. Peter