From: Christos Kannas <chriskannas@gmail.com>
To: galaxy-dev@lists.bx.psu.edu
Cc: 
Date: Fri, 8 Feb 2013 14:35:25 +0200
Subject: [galaxy-dev] Error when trying to change the permissions in data libraries.

Hi,

In our local Galaxy server an error came up today.

When I try to edit the permissions of data librarles via the Admin panel I get the following error:

(Also attached is an image of the following error)

UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 0: ordinal not in range(128)

URL: http://lisis.cs.ucy.ac.cy/library_common/library_permissions?show_deleted=False&cntrller=library_admin&use_panels=False&id=0174dcff8bad94a7

File '/home/galaxy/galaxy-dist/eggs/WebError-0.8a-py2.6.egg/weberror/evalexception/middleware.py', line 364 in respond

  app_iter = self.application(environ, detect_start_response)

File '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/debug/prints.py', line 98 in __call__

  environ, self.app)

File '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/wsgilib.py', line 539 in intercept_output

  app_iter = application(environ, replacement_start_response)

File '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/recursive.py', line 80 in __call__

  return self.application(environ, start_response)

File '/home/galaxy/galaxy-dist/eggs/Paste-1.6-py2.6.egg/paste/httpexceptions.py', line 632 in __call__

  return self.application(environ, start_response)

File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/base.py', line 160 in __call__

  body = method( trans, **kwargs )

File '/home/galaxy/galaxy-dist/lib/galaxy/webapps/galaxy/controllers/library_common.py', line 262 in library_permissions

  status=status )

File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line 832 in fill_template

  return self.fill_template_mako( filename, **kwargs )

File '/home/galaxy/galaxy-dist/lib/galaxy/web/framework/__init__.py', line 843 in fill_template_mako

  return template.render( **data )

File '/home/galaxy/galaxy-dist/eggs/Mako-0.4.1-py2.6.egg/mako/template.py', line 296 in render

  return runtime._render(self, self.callable_, args, data)

File '/home/galaxy/galaxy-dist/eggs/Mako-0.4.1-py2.6.egg/mako/runtime.py', line 660 in _render

  **_kwargs_for_callable(callable_, data))

File '/home/galaxy/galaxy-dist/eggs/Mako-0.4.1-py2.6.egg/mako/runtime.py', line 692 in _render_context

  _exec_template(inherit, lclcontext, args=args, kwargs=kwargs)

File '/home/galaxy/galaxy-dist/eggs/Mako-0.4.1-py2.6.egg/mako/runtime.py', line 718 in _exec_template

  callable_(context, *args, **kwargs)

File '/home/galaxy/galaxy-dist/database/compiled_templates/base.mako.py', line 42 in render_body

  __M_writer(unicode(next.body()))

File '/home/galaxy/galaxy-dist/database/compiled_templates/library/common/library_permissions.mako.py', line 76 in render_body

  __M_writer(unicode(render_permission_form( library, library.name, h.url_for( controller='library_common', action='library_permissions', cntrller=cntrller, id=trans.security.encode_id( library.id ), show_deleted=show_deleted ), roles, do_not_render=[], all_roles=all_roles )))

File '/home/galaxy/galaxy-dist/database/compiled_templates/dataset/security_common.mako.py', line 108 in render_render_permission_form

  __M_writer(unicode(render_select( current_actions, k, v, all_roles )))

File '/home/galaxy/galaxy-dist/database/compiled_templates/dataset/security_common.mako.py', line 34 in render_select

  return render_render_select(context,current_actions,action_key,action,roles)

File '/home/galaxy/galaxy-dist/database/compiled_templates/dataset/security_common.mako.py', line 190 in render_render_select

  __M_writer(unicode(role.name))

UnicodeDecodeError: 'ascii' codec can't decode byte 0xc3 in position 0: ordinal not in range(128)

We are using a modified version of Galaxy.

The info from hg (latest galaxy-dist we have pulled):

changeset:   7828:b5bda7a5c345

user:        Nate Coraor <nate@bx.psu.edu>

date:        Fri Oct 05 15:49:26 2012 -0400

summary:     Fix the Compute tool to only allow for execution of a limited set of expressions.

What we have to do to fix it?

Thanks,

Christos

-- 

Christos Kannas
Researcher
Ph.D Student 

e-Health Laboratory
kannas.christos@ucy.ac.cy
kannas.christos@cs.ucy.ac.cy
chriskannas@gmail.com 

...