There is a 'git' missing in there. Try:
sudo git checkout master && git pull --ff-only origin master

-Will


On Fri, May 20, 2016 at 11:42 AM, Scott Szakonyi <Scott.B.Szakonyi.1@nd.edu> wrote:
Hello,

I'm currently running Galaxy 16.01, and I'd like to upgrade to 16.04. However, when I attempt to do so, I get an error, and git log shows I'm still on 16.01.

$ sudo git checkout master && pull --ff-only origin master
M tool-data/all_fasta.loc.sample
Already on 'master'
-bash: pull: command not found

I also tried updating to the exact version:

sudo git checkout v16.04
error: pathspec 'v16.04' did not match any file(s) known to git.

For the record, I'm using Git 1.7.1. I took my commands directory from the announcement page at https://docs.galaxyproject.org/en/master/releases/16.04_announce.html

Any suggestions for ways to get the 16.04 code are greatly appreciated!

Best,

--
Scott B. Szakonyi
Research Programmer

Center for Research Computing
107 Information Technology Center
Notre Dame, IN 46556

http://crc.nd.edu


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