Hi Nikhil, I've been using your Galaxy wrapper for deseq_and_sam2counts. I fixed it up to run the R script from the tool install directory directly, so no manual copying of the script is required after installation in the Galaxy GUI. I attach my patch (as a Mercurial export), and hope you will incorporate this into the official repository, to avoid me having to maintain my own version. If it's more convenient for you to receive the update in a different form, please say. Thanks for making the tool wrapper available. cheers, Simon ======================================================================= Attention: The information contained in this message and/or attachments from AgResearch Limited is intended only for the persons or entities to which it is addressed and may contain confidential and/or privileged material. Any review, retransmission, dissemination or other use of, or taking of any action in reliance upon, this information by persons or entities other than the intended recipients is prohibited by AgResearch Limited. If you have received this message in error, please notify the sender immediately. =======================================================================