Hi,

i all, my first post in the mailing list. I started one moth ago galaxy (at the conference) and the tool is really impressive. thx for it. 

I installed a local version of galaxy (http://ampere.ulb.ac.be), but i am having some trouble when uploading private data on it.

Here is the procedure i followed:

1/ I got sra samples from ncbi:

2/ i transformed these sra in fastq format using the sratoolkit

--> this provides me fastq files of 25Gb

3/ PROBLEMS:

a/ IF I try to upload the data set using an URL in upload file 

(I created a controller here: http://insilico.ulb.ac.be/publicutilities/sendonthefly?url=/fs1-ampere/GenomicsData/ERP000546/ERR030856.fastq)

then only 155Mb are uploaded to galaxy (and no error)

b/ if i try to follow that method: https://bitbucket.org/galaxy/galaxy-central/wiki/DataLibraries/UploadingFiles

and i try to get data from the server, the menu "upload files from filesystem paths" and "upload directory of files" are not present.

==> no way to access these files locally

any hints for that?

thx

Colin