Hi,

 

I am sure these questions had been asked before but could not find the right answer or did not look enough J .  I just want to add new aligner tool wrapper into local galaxy.  I used the existing wrappers (i.e bwa) as template and then modified it accordingly.  

 

Here are what I did:

Create an xml file and put it to “~tools/sr_mapping/mytool.xml”

·         Created a py file and added it to the same folder “~tools/sr_mapping/myTool.py”

·         Configured the tool_conf.xml file

·         Restarted my galaxy server

 

However, the new tool did not show up in the GUI. 

 

Is there anything else I am missing?

Is there a validation step I need to perform for both files?

 

I appreciate your help.

 

Regards