Am Sonntag, den 17.03.2013, 15:26 +0000 schrieb Peter Cock:
On Sun, Mar 17, 2013 at 3:13 PM, Björn Grüning wrote:
Hi all,
can anyone confirm that the parallelism features is not working in galaxy-central? Parallelism is among others used by the blast+ wrappers.
The only error message I get is:
galaxy.jobs DEBUG 2013-03-17 16:08:27,729 (64174) Working directory for job is: /media/data/web/galaxy-central/database/job_working_directory/064/64174 galaxy.jobs.handler DEBUG 2013-03-17 16:08:27,750 (64174) Dispatching to tasks runner galaxy.jobs.handler ERROR 2013-03-17 16:08:27,750 put(): (64174) Invalid job runner: tasks galaxy.datatypes.metadata DEBUG 2013-03-17 16:08:28,079 Cleaning up external metadata files galaxy.jobs.handler INFO 2013-03-17 16:08:28,120 (64174) Job dispatched
It's working fine for me with galaxy-dist. Thanks! Bjoern
Which hg revision are you on from galaxy-central? It was working for me last time I tested, but my setup isn't fully up-to-date with the development repository.
I'm on 9088:1aa6224b32c2. Which hg revision are you using? Maybe I can track down the commit. handler.py changed a lot recently :(
(This makes a nice change from it being me reporting that something on the trunk broke the parallelism features - that's happened a couple of time now sadly.)
You're welcome! Bjoern
Regards,
Peter