Hi Pieter, there seems to be either multiple incorrect links to the file or the wrappers expect multiple files that are missing from the repo. E.g. your wrapper library_lookup.xml refers to a file /GCMS/match_library.py which does not exist. (on this line: <code file="match_library.py" />) After you correct these links you might want to 'Reset repository metadata'. Martin On Thu, Mar 19, 2015 at 8:18 AM Lukasse, Pieter <pieter.lukasse@wur.nl> wrote:
Hi ,
I’m getting this error message, which is not correct since the file IS available in the repository.
Metadata may have been defined for some items in revision 'f70b775dcaa5'. Correct the following problems if necessary and reset metadata. *create_model.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *library_lookup.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *query_metexp.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *query_mass_repos.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *metams_lcms_annotate.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *rankfilterGCMS_tabular.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error. *metams_lcms_annotate.xml* - This file refers to a missing file *match_library.py*. Upload a file named *match_library.py* to the repository to correct this error.
I installed the package anyway and it works, which proves there is no real problem.
See https://toolshed.g2.bx.psu.edu/view/pieterlukasse/prims_metabolomics2
Regards,
Pieter Lukasse
Wageningen UR, Plant Research International
Department of Bioinformatics (Bioscience)
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands
T: +31-317481122; M: +31-628189540; skype: pieter.lukasse.wur
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