Is there a actually a "Repository Installation Error below" - it is hard to say what went wrong without more logging? It is certainly frustrating that that package installation is failing - it seems to be a quite straight-forward installation definition. -John On Thu, Nov 13, 2014 at 3:19 PM, Ryan G <ngsbioinformatics@gmail.com> wrote:
I'm following the guide on https://wiki.galaxyproject.org/Admin/Tools/AddToolFromToolShedTutorial to add a tool from the tool shed.
The tutorial uses 'bwa_base', but I don't see that. So instead, I'm using 'bwa_mem'. I choose 'Preview and Install', then 'Install to Galaxy'. I then select to have it installed in 'NGS: Mapping' tool panel, then click Install.
The page then shows two tools: bwa_mem, and package_bwa_0_7_7. Both of which show 'Error' as the status. Clicking on 'bwa_mem' shows some information with "This repository is not installed correctly (see the Repository Installation Error below)...."
What does this mean? And how do I fix it?
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