Grainne Kerr wrote:
Dear all,
I'm not sure if its a galaxy issue, but perhaps someone could give me some advice on where to look or some configuration to set or...
I am trying to set up a local installation of Galaxy in for a multi-uer environment. I've installed it on a compute cluster, running centos 5.5, python2.4, a TORQUE scheduler with Maui.
Server name: b110-sc-hdn Compute cluster has three nodes. These are called: headnode, computenode1, computenode2
The default queue on the cluster is called "galaxy_queue". I've set jobs to run on this queue in the universe_wsgi.ini file
However, when I try to run a job, I get the following error:
"galaxy.jobs.runners.pbs DEBUG 2010-11-14 16:48:56,410 (59) pbs_submit failed, PBS error 15024: Max hop count exceeded"
From the research I have done, seemingly this occurs when there are issues resolving the domain name. But, I don't know how to check this or fix this.
I've ran the attached python test script which imports pbs python package. And it works fine. In the script, if I change the server name to "b110-sc-hdn", I recreate the error. Is there something obvious I am not getting?
Hi Grainne, In your test script, could you see what value pbs.pbs_default() is returning? Also, check that one of the following is true: 'b110-sc-hdn' is set in /etc/hosts and is the same IP address that is resolved by your DNS server? OR 'b110-sc-hdn' does not appear in /etc/hosts, and resolves via DNS to the IP address of your server. --nate
Any help would be very much appreciated and thanks alot for an exceptional tool!
Grainne.
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