On Oct 18, 2017, at 11:51 AM, Devon Ryan <dpryan79@gmail.com> wrote:

Assuming you don't have galaxy set to clean up job working directories upon failure, have a look at the tool_script.sh in that directory and see if you can discern the issue. Also check the conda activation log file (under working/ I think) in that directory to see if it has anything useful.

Devon

On 10/18/2017 05:46 PM, Deepak Tanwar wrote:

Hello,

I am still facing problem. I have tried to reinstall MACS2 but nothing helped.

Thank you!

Deepak

On Oct 16, 2017, at 4:00 PM, Deepak Tanwar <dktanwar@hotmail.com> wrote:

Hi all,

There is some problem with MACS2:

export/galaxy-central/database/job_working_directory/000/380/tool_script.sh: line 25: macs2: command not found Fatal error: Exit code 127 ()

Tool installed: /shed_tools/toolshed.g2.bx.psu.edu/repos/iuc/macs2/f5d67c722d67/macs2

Dependency Resolver Details

Dependency Version Resolver Exact version Current Installation Status macs2 2.1.1.20160309 Conda True gawk 4.1.3 Conda True

Thank you,

Deepak

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-- 
Devon Ryan, PhD
Bioinformatician / Data manager
Bioinformatics Core Facility
Max Planck Institute for Immunobiology and Epigenetics
Email: dpryan79@gmail.com