Sure, my combo-box is correctly filled with all options, but unfiltered. <table comment_char="#" name="dbindel"> <columns>value, dbkey, name, path</columns> <file path="****" /> </table> </tables> Le 04/11/2016 à 13:42, Nicola Soranzo a écrit :
Hi Vincent, have you defined the dbindel table in config/tool_data_table_conf.xml ?
Cheers, Nicola
On 04/11/16 08:09, Vincent Cahais wrote:
Dear All,
I try to filter options for a param linked to a datatable. I want to keep only options with the same dbkey as my input file. But i cannot make it work.
<param name="input" type="data" format="bam" label="Bam file"/> <param name="dbindel" type="select" force_select="true" label="indel database"> <options from_data_table="dbindel" /> <filter type="data_meta" ref="input" key="dbkey" /> <filter type="remove_value" key="dbkey"/> </param>
##dbindels #<unique_build_id> <dbkey> <display_name> <file_path> hg38 hg38 Human /data/genome/hg38/dbindel/Mills_and_1000G_gold_standard.indels.hg38.vcf mm10_1 mm10 Mouse [All] /data/genomes/mm10/dbindel/mgp.v5.merged.indels.dbSNP142.normed.vcf.gz mm10_2 mm10 Mouse [129P2_OlaHsd] /data/genome/mm10/dbindel/129P2_OlaHsd.mgp.v5.indels.dbSNP142.normed.vcf.gz
Thank you for help,
Vincent ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/
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