Hi all - I'm trying to figure out how to script the ability to upload data (fastq) files to Galaxy via the API.
I can get the Library's root_folder_id, but am unsure of what the API call is to upload a file. I'm constructing this dictionary:
data = {}
data['folder_id'] = galaxyFolderId
data['create_type'] = 'file'
data['file_type'] = 'fastq'
data['upload_option'] = 'upload_paths'
data['filesystem_paths'] = fileToUpload
data['link_data_only'] = 'link_to_files'
I assume this is the correct format based on other code I've seen, but I'm not sure what the actual submit call should be. 'api/libraries/' or 'api/folders'????