Hello Jereme,
I am going to post your question over to the galaxy-dev@bx.psu.edu
mailing list to give it better visibility to the development
community. This is also where you will want to post future questions
about your local install.
http://wiki.galaxyproject.org/MailingLists
For you question about cluster set-up:
Starting at our basic install help:
-> http://wiki.galaxyproject.org/Admin/Get%20Galaxy
At the bottom of the page is a link "Running Galaxy in a production
environment" that has help for getting your server set up to use a
cluster:
->
http://wiki.galaxyproject.org/Admin/Config/Performance/ProductionServer
The documentation for "
Using a compute cluster" will then point to:
-> http://wiki.galaxyproject.org/Admin/Config/Performance/Cluster
Now, we there is a release pending. I might be worth waiting a week
or so for this, unless you are already pulling from galaxy-central
(and not the galaxy-dist) repository, to avoid having to configure
changes twice.
If you have follow-up, please leave the question on the mailing list
- the developers will have the best advice about details.
Best,
Jen
Galaxy team
On 3/26/13 6:25 AM, leconte wrote:
hello
I have installed an galaxy instance for purpose testing on a 8
CPU server without problem all run perfectly.
I have made some galaxy xml wrapper to understant how galaxy
calls program and other little things.
Now I want to install a Galaxy server with a cluster
configuration.
Before I have tested HTCondor but I have no Idea how I can mix
Galaxy and HTCondor.
The perfect thing was somebody have already tested this type of
condor.
But I can satisfy myself with any other cluster type.
What I don't understant in fact ( maybe my worst problem ) where
lie all parts of this puzzle.
I explain.
I know that I need Galaxy. I know too I need a cluster ( in my
case HTCondor )
I understand I need something between these 2 parts ... I think
something like PBS or SGE but it's not totaly clear for me
I'm search on galaxy mailling list archive ... but I just found 2
mails in 2008 :(
has anybody made this conf or have a configuration ?
greetings
PS : sorry for my poor english :)
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists,
please use the interface at:
http://lists.bx.psu.edu/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
--
Jennifer Hillman-Jackson
Galaxy Support and Training
http://galaxyproject.org