extra data| CGI Variables |
|---|
| CONTENT_LENGTH | '0' |
| HTTP_ACCEPT | 'text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8' |
| HTTP_ACCEPT_CHARSET | 'ISO-8859-1,utf-8;q=0.7,*;q=0.3' |
| HTTP_ACCEPT_ENCODING | 'gzip,deflate,sdch' |
| HTTP_ACCEPT_LANGUAGE | 'en-US,en;q=0.8' |
| HTTP_CONNECTION | 'keep-alive' |
| HTTP_COOKIE | '__utma=66120872.977517160.1310045015.1325861530.1330104947.7;__utmz=66120872.1311045198.4.4.utmcsr=news.wisc.edu|utmccn=(referral)|utmcmd=referral|utmcct=/19571; __unam=a09e0f7-1312ec609b3-18b6bbaa-11; _saml_idp=aHR0cHM6Ly9sb2dpbi53aXNjLmVkdS9pZHAvc2hpYmJvbGV0aA%3D%3D+;galaxysession=c6ca0ddb55be603a4f09296d70d12dd2ed57e5d59af9de061cbc7c473ecbb378aecb2e3d2b895568' |
| HTTP_HOST | '' |
| HTTP_REFERER | '<snip>' |
| HTTP_USER_AGENT | 'Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_3) AppleWebKit/535.19 (KHTML, like Gecko) Chrome/18.0.1025.162 Safari/535.19' |
| PATH_INFO | '/history/export_archive' |
| REMOTE_ADDR | '192.168.1.47' |
| REQUEST_METHOD | 'GET' |
| SERVER_NAME | '0.0.0.0' |
| SERVER_PORT | '8080' |
| SERVER_PROTOCOL | 'HTTP/1.1' |
| Configuration |
|---|
| __file__ | '[path to galaxy]/galaxy_dist/universe_wsgi.ini' |
| admin_users | ' |
| allow_library_path_paste | 'True' |
| allow_user_creation | 'False' |
| allow_user_deletion | 'True' |
| database_connection | '' |
| database_engine_option_max_overflow | '100' |
| database_engine_option_pool_size | '100' |
| datatypes_config_file | 'datatypes_conf.xml' |
| debug | 'True' |
| enable_api | 'True' |
| enable_job_recovery | 'False' |
| enable_pages | 'True' |
| enable_tracks | 'True' |
| file_path | 'database/files' |
| here | '/galaxy_dist' |
| library_import_dir | '<Msnip>' |
| local_job_queue_workers | '25' |
| new_file_path | 'database/tmp' |
| require_login | 'True' |
| smtp_server | '<snip>' |
| static_cache_time | '360' |
| static_dir | '[path to galaxy]/galaxy_dist/static/' |
| static_enabled | 'True' |
| static_favicon_dir | '[path to galaxy]/galaxy_dist/static/favicon.ico' |
| static_images_dir | '/galaxy_dist/static/images' |
| static_scripts_dir | '[path to galaxy]/galaxy_dist/static/scripts/' |
| static_style_dir | '/galaxy_dist/static/june_2007_style/blue' |
| tool_config_file | 'tool_conf.xml' |
| tool_data_path | 'tool-data' |
| tool_path | 'tools' |
| use_interactive | 'False' |
| user_library_import_dir | '[path to galaxy]/galaxy_dist/database/directory_upload' |
| WSGI Variables |
|---|
| application | <paste.debug.prints.PrintDebugMiddleware object at 0x4cecfd0> |
| paste.cookies | (<SimpleCookie: __unam='a09e0f7-1312ec609b3-18b6bbaa-11' __utma='66120872.977517160.1310045015.1325861530.1330104947.7' __utmz='66120872.1311045198.4.4.utmcsr=news.wisc.edu|utmccn=(referral)|utmcmd=referral|utmcct=/19571' _saml_idp='aHR0cHM6Ly9sb2dpbi53aXNjLmVkdS9pZHAvc2hpYmJvbGV0aA%3D%3D+' galaxysession='c6ca0ddb55be603a4f09296d70d12dd2ed57e5d59af9de061cbc7c473ecbb378aecb2e3d2b895568'>, '__utma=66120872.977517160.1310045015.1325861530.1330104947.7;__utmz=66120872.1311045198.4.4.utmcsr=news.wisc.edu|utmccn=(referral)|utmcmd=referral|utmcct=/19571; __unam=a09e0f7-1312ec609b3-18b6bbaa-11; _saml_idp=aHR0cHM6Ly9sb2dpbi53aXNjLmVkdS9pZHAvc2hpYmJvbGV0aA%3D%3D+;galaxysession=c6ca0ddb55be603a4f09296d70d12dd2ed57e5d59af9de061cbc7c473ecbb378aecb2e3d2b895568') |
| paste.expected_exceptions | [<class 'paste.httpexceptions.HTTPException'>] |
| paste.httpexceptions | <paste.httpexceptions.HTTPExceptionHandler object at 0x4cd8430> |
| paste.httpserver.thread_pool | <paste.httpserver.ThreadPool object at 0x1205970> |
| paste.printdebug_listeners | [<cStringIO.StringO object at 0x4bc5ac0>, <open file '<stderr>', mode 'w' at 0x350d0>] |
| paste.recursive.forward | <paste.recursive.Forwarder from /> |
| paste.recursive.include | <paste.recursive.Includer from /> |
| paste.recursive.include_app_iter | <paste.recursive.IncluderAppIter from /> |
| paste.recursive.script_name | '' |
| paste.remove_printdebug | <function remove_printdebug at 0x4b939b0> |
| paste.throw_errors | True |
| webob._parsed_query_vars | (MultiDict([]), '') |
| wsgi process | 'Multithreaded' |
URL:
<snip>
Module
paste.exceptions.errormiddleware:
143 in
__call__>> app_iter = self.application(environ, start_response)Module
paste.debug.prints:
98 in
__call__>> environ, self.app)Module
paste.wsgilib:
539 in
intercept_output>> app_iter = application(environ, replacement_start_response)Module
paste.recursive:
80 in
__call__>> return self.application(environ, start_response)Module
paste.httpexceptions:
632 in
__call__>> return self.application(environ, start_response)Module
galaxy.web.framework.base:
160 in
__call__>> body = method( trans, **kwargs )Module
galaxy.web.controllers.history:
679 in
export_archive>> history_exp_tool.execute( trans, incoming = params, set_output_hid = True )Module
galaxy.tools:
1661 in
execute>> return self.tool_action.execute( self, trans, incoming=incoming, set_output_hid=set_output_hid, history=history,**kwargs )Module
galaxy.tools.actions.history_imp_exp:
121 in
execute>> trans.sa_session.flush()Module
sqlalchemy.orm.scoping:
127 in
do>> return getattr(self.registry(), name)(*args, **kwargs)Module
sqlalchemy.orm.session:
1356 in
flush>> self._flush(objects)Module
sqlalchemy.orm.session:
1434 in
_flush>> flush_context.execute()Module
sqlalchemy.orm.unitofwork:
261 in
execute>> UOWExecutor().execute(self, tasks)Module
sqlalchemy.orm.unitofwork:
753 in
execute>> self.execute_save_steps(trans, task)Module
sqlalchemy.orm.unitofwork:
768 in
execute_save_steps>> self.save_objects(trans, task)Module
sqlalchemy.orm.unitofwork:
759 in
save_objects>> task.mapper._save_obj(task.polymorphic_tosave_objects, trans)Module
sqlalchemy.orm.mapper:
1424 in
_save_obj>> c = connection.execute(statement.values(value_params), params)Module
sqlalchemy.engine.base:
824 in
execute>> return Connection.executors[c](self, object, multiparams, params)Module
sqlalchemy.engine.base:
874 in
_execute_clauseelement>> return self.__execute_context(context)Module
sqlalchemy.engine.base:
896 in
__execute_context>> self._cursor_execute(context.cursor, context.statement, context.parameters[0], context=context)Module
sqlalchemy.engine.base:
950 in
_cursor_execute>> self._handle_dbapi_exception(e, statement, parameters, cursor, context)Module
sqlalchemy.engine.base:
931 in
_handle_dbapi_exception>> raise exc.DBAPIError.instance(statement, parameters, e, connection_invalidated=is_disconnect)IntegrityError: (IntegrityError) duplicate key value violates unique constraint "job_export_history_archive_pkey" 'INSERT INTO job_export_history_archive (id, job_id, history_id, dataset_id, compressed, history_attrs_filename, datasets_attrs_filename, jobs_attrs_filename) VALUES (%(id)s, %(job_id)s, %(history_id)s, %(dataset_id)s, %(compressed)s, %(history_attrs_filename)s, %(datasets_attrs_filename)s, %(jobs_attrs_filename)s)' {'job_id': 142241L, 'jobs_attrs_filename': '[path to galaxy]/galaxy_dist/database/tmp/tmpxvS9aW/tmpbAz3Bx', 'history_id': 2320, 'datasets_attrs_filename':[path to galaxy]/galaxy_dist/database/tmp/tmpxvS9aW/tmpsYUMXS', 'history_attrs_filename': '[path to galaxy]/galaxy_dist/database/tmp/tmpxvS9aW/tmplIz1m6', 'dataset_id': 185986L, 'id': 2L, 'compressed': True}