Hi Greg,

Our Galaxy version is galaxy-dist 7712:e6444e7a1685 . The tool is “contra” from this repo: http://fcaramia@toolshed.g2.bx.psu.edu/repos/fcaramia/contra
I own the repo and uploaded the tool_dependencies file
Then the following steps:

Installing the tool from toolshed: Success
Installing tool dependencies: Failed
Deleting tool: Success
Re-installing tool: Failed


Thanks,

Franco




On 4/12/12 12:40 AM, "Greg Von Kuster" <greg@bx.psu.edu> wrote:

Hello Franco,

It's impossible to help you with this issue and the issues you sent in your previous messages unless you provide more information.  What version of Galaxy are you running?  From what tool shed are you installing repositories.  What repository are you installing?  What are the precise steps you took to produce the behavior?

Keep in mind that the Galaxy test tool shed tracks the galaxy-central repository on bitbucket while the Galaxy main tool shed tracks the galaxy-dist repository on bitbucket.

Greg Von Kuster

On Dec 2, 2012, at 11:36 PM, Franco Caramia wrote:

URL: http://bioinf-galaxy/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a
Module paste.exceptions.errormiddleware:143 in __call__
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> app_iter = self.application(environ, start_response)
Module paste.debug.prints:98 in __call__
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> environ, self.app)
Module paste.wsgilib:539 in intercept_output
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> app_iter = application(environ, replacement_start_response)
Module paste.recursive:80 in __call__
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return self.application(environ, start_response)
Module paste.httpexceptions:632 in __call__
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return self.application(environ, start_response)
Module galaxy.web.framework.base:160 in __call__
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> body = method( trans, **kwargs )
Module galaxy.web.framework:184 in decorator
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return func( self, trans, *args, **kwargs )
Module galaxy.web.controllers.admin_toolshed:350 in browse_repositories
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return self.reselect_tool_panel_section( trans, **kwd )
Module galaxy.web.framework:184 in decorator
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return func( self, trans, *args, **kwargs )
Module galaxy.web.controllers.admin_toolshed:1352 in reselect_tool_panel_section
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> status=status )
Module galaxy.web.framework:746 in fill_template
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return self.fill_template_mako( filename, **kwargs )
Module galaxy.web.framework:757 in fill_template_mako
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return template.render( **data )
Module mako.template:296 in render
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> return runtime._render(self, self.callable_, args, data)
Module mako.runtime:660 in _render
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> **_kwargs_for_callable(callable_, data))
Module mako.runtime:692 in _render_context
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> _exec_template(inherit, lclcontext, args=args, kwargs=kwargs)
Module mako.runtime:718 in _exec_template
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> callable_(context, *args, **kwargs)
Module _base_mako:42 in render_body
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> __M_writer(unicode(next.body()))
Module _admin_tool_shed_repository_reselect_tool_panel_section_mako:76 in render_body
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> __M_writer(unicode(render_tool_dependency_section( install_tool_dependencies_check_box, [ repo_info_dict ] )))
Module _admin_tool_shed_repository_common_mako:204 in render_render_tool_dependency_section
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> changeset_revision )
Module posixpath:67 in join
>>   <http://bioinf-galaxy:83/admin_toolshed/browse_repositories?operation=activate+or+reinstall&id=88ee2d7021e4dc1a#> elif path == '' or path.endswith('/'):
AttributeError: 'NoneType' object has no attribute 'endswith' ___________________________________________________________
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