On Feb 2, 2012, at 12:22 PM, Nate Coraor wrote:
On Feb 2, 2012, at 10:35 AM, Shantanu Pavgi wrote:
Peter,
I am having similar issue and it started happening only after the recent update. See: http://galaxy-development-list-archive.2308389.n4.nabble.com/job-cleanup-fil...
I haven't had chance to follow up on my thread yet. But I do think these are redundant warning messages probably getting triggered as file deletion has occurred somewhere before this particular cleanup action.
Ahh, I see what's going on here. The drm out/err files are now being written to the job working directory, which is cleaned up at the end of the job wrapper's finish method, before the drmaa runner's cleanup method executes. The warnings are harmless and I'll have a fix for them shortly.
Fixed in changeset 238207122b68. --nate
--nate
-- Shantanu
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